Evidence map›Paper›PMID 34255308›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2021

Helicobacter pylori virulence dupA gene: risk factor or protective factor?

Lucas Luiz de Lima Silva, Ana Karoline Silva Oliveira, Aline Rodrigues Gama, Amanda Ferreira Paes Landim Ramos, Antonio Márcio Teodoro Cordeiro Silva, Angel José Vieira Blanco, José Daniel Gonçalves Vieira, Lucas Trevizani Rasmussem, Lilian Carla Carneiro, Mônica Santiago Barbosa

Open access · greenAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. The Effect ofPathogens (Basel, Switzerland) · 2025
    Article
  5. Frontiers in cellular and infection microbiology · 2023
    Article
  6. Helicobacter pylori: an up-to-date overview on the virulence and pathogenesis mechanisms.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Lucas Luiz de Lima SilvaInstituto de Patologia Tropical e Saúde Pública, Núcleo de Estudo da Helicobacter pylori, Departamento de Biociências e Tecnologia, Universidade Federal de Goiás, Leste Universitário, Goiânia, GO, Brazil.
Ana Karoline Silva OliveiraInstituto de Patologia Tropical e Saúde Pública, Núcleo de Estudo da Helicobacter pylori, Departamento de Biociências e Tecnologia, Universidade Federal de Goiás, Leste Universitário, Goiânia, GO, Brazil.
Aline Rodrigues GamaInstituto de Patologia Tropical e Saúde Pública, Núcleo de Estudo da Helicobacter pylori, Departamento de Biociências e Tecnologia, Universidade Federal de Goiás, Leste Universitário, Goiânia, GO, Brazil.
Amanda Ferreira Paes Landim RamosInstituto de Patologia Tropical e Saúde Pública, Núcleo de Estudo da Helicobacter pylori, Departamento de Biociências e Tecnologia, Universidade Federal de Goiás, Leste Universitário, Goiânia, GO, Brazil.
Antonio Márcio Teodoro Cordeiro SilvaDepartamento de Medicina, Faculdade de Ciências Médicas, Farmacêuticas e Biomédicas, Universidade Católica de Goiás, Goiânia, GO, Brazil.
Angel José Vieira BlancoDepartamento de Áreas Acadêmicas, Instituto Federal de Educação Ciência e Tecnologia, Campus Inhumas, Inhumas, GO, Brazil.
José Daniel Gonçalves VieiraInstituto de Patologia Tropical e Saúde Pública, Núcleo de Estudo da Helicobacter pylori, Departamento de Biociências e Tecnologia, Universidade Federal de Goiás, Leste Universitário, Goiânia, GO, Brazil.
Lucas Trevizani RasmussemDepartamento de Genética, Faculdade de Medicina de Marília, Marilia, SP, Brazil.
Lilian Carla CarneiroInstituto de Patologia Tropical e Saúde Pública, Núcleo de Estudo da Helicobacter pylori, Departamento de Biociências e Tecnologia, Universidade Federal de Goiás, Leste Universitário, Goiânia, GO, Brazil.
Mônica Santiago BarbosaInstituto de Patologia Tropical e Saúde Pública, Núcleo de Estudo da Helicobacter pylori, Departamento de Biociências e Tecnologia, Universidade Federal de Goiás, Leste Universitário, Goiânia, GO, Brazil. santiago@ufg.br.
Universidade Federal de Goiás · BRFaculdade de Medicina de Marília · BRPontifícia Universidade Católica de Goiás · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Helicobacter pylori is the etiological agent of chronic gastritis, peptic ulcer, and gastric cancer. The duodenal ulcer-promoting gene dupA, which is located in the plasticity region of the H. pylori genome, is homologous to the virB gene which encodes a type IV secretion protein in Agrobacterium tumefaciens. Studies have shown associations between H. pylori dupA-positive strains and gastroduodenal diseases. However, whether dupA acts as a risk factor or protective factor in these diseases remains unclear. Therefore, in this study, we aimed to verify the presence of the dupA gene in infectious H. pylori strains in the Brazilian mid-west and to investigate its association with the clinical outcomes of patients with dyspepsia. Additionally, the phylogenetic origin of the strains was determined. Gastric biopsies from 117 patients with dyspepsia were analyzed using histological and molecular techniques. The hpx gene (16S rRNA) was used to screen for H. pylori infection, and positive samples were then subjected to dupA gene detection and sequencing. The estimated prevalence of H. pylori infection was 64.1%, with the dupA gene being detected in a high proportion of infectious strains (70.7%). Furthermore, a risk analysis revealed that for women, a dupA-positive H. pylori infection increased the chance of developing gastritis by twofold. The partial dupA sequences from isolated infectious strains in this work are similar to those of strains isolated in westerns countries. This study provides useful insights for understanding the role of the H. pylori dupA gene in disease development.

Indexed as

Bacterial ProteinsHelicobacter InfectionsHelicobacter pyloriVirulence FactorsBrazilDyspepsiaFemaleHumansMalePhylogenyProtective FactorsRisk FactorsRNA, Ribosomal, 16SBacterial ProteinsRNA, Ribosomal, 16SVirulence FactorsdupAFactors virulenceGastritisGeneH. pyloriMolecular pathology

Identifiers

PMID34255308
PMCPMC8578514
OpenAlexW3182979295

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.