Evidence map›Paper›PMID 34253898›Full record

ArticleNature cell biology2021

Chemotherapy-induced transposable elements activate MDA5 to enhance haematopoietic regeneration.

Thomas Clapes, Aikaterini Polyzou, Pia Prater, Sagar, Antonio Morales-Hernández, Mariana Galvao Ferrarini, Natalie Kehrer, Stylianos Lefkopoulos, Veronica Bergo, Barbara Hummel and 15 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Nature cell biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
5.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 86 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors at 6 institutions in 4 countries.

Thomas Clapes *Department of Cellular and Molecular Immunology, Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.ORCID http://orcid.org/0000-0002-2578-0563
Aikaterini Polyzou *Department of Cellular and Molecular Immunology, Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Pia Prater *Department of Cellular and Molecular Immunology, Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
SagarMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Antonio Morales-HernándezDepartment of Hematology, St Jude Children's Research Hospital, Memphis, TN, USA.
Mariana Galvao FerrariniUniv Lyon, INSA-Lyon, INRAE, BF2I, UMR0203, Villeurbanne, France.ORCID http://orcid.org/0000-0002-9574-9991
Natalie KehrerDepartment of Cellular and Molecular Immunology, Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.ORCID http://orcid.org/0000-0003-2412-1889
Stylianos LefkopoulosDepartment of Cellular and Molecular Immunology, Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.ORCID http://orcid.org/0000-0003-4413-0379
Veronica BergoDepartment of Cellular and Molecular Immunology, Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Barbara HummelMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Nadine ObierDepartment of Cellular and Molecular Immunology, Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Daniel MaticzkaDepartment of Computer Science, University of Freiburg, Freiburg, Germany.
Anne BridgemanMedical Research Council Human Immunology Unit, Medical Research Council Weatherall Institute of Molecular Medicine, Radcliffe Department of Medicine, University of Oxford, Oxford, UK.
Josip S HermanMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.ORCID http://orcid.org/0000-0002-1735-0846
Ibrahim IlikDepartment of Chromatin Regulation, Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Lhéanna KlaeyléDepartment of Cellular and Molecular Immunology, Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Jan RehwinkelMedical Research Council Human Immunology Unit, Medical Research Council Weatherall Institute of Molecular Medicine, Radcliffe Department of Medicine, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0003-3841-835X
Shannon McKinney-FreemanDepartment of Hematology, St Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0001-8061-2557
Rolf BackofenDepartment of Computer Science, University of Freiburg, Freiburg, Germany.ORCID http://orcid.org/0000-0001-8231-3323
Asifa AkhtarDepartment of Chromatin Regulation, Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.ORCID http://orcid.org/0000-0001-8973-6193
Nina Cabezas-WallscheidDepartment of Cellular and Molecular Immunology, Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.ORCID http://orcid.org/0000-0003-0870-0530
Ritwick SawarkarMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Rita RebolloUniv Lyon, INSA-Lyon, INRAE, BF2I, UMR0203, Villeurbanne, France.
Dominic GrünMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.ORCID http://orcid.org/0000-0002-3364-5898
Eirini TrompoukiDepartment of Cellular and Molecular Immunology, Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany. trompouki@ie-freiburg.mpg.de.ORCID http://orcid.org/0000-0002-7242-8810
University of Freiburg · DEMax Planck Institute of Immunobiology and Epigenetics · DESt. Jude Children's Research Hospital · USUniversité Claude Bernard Lyon 1 · FRUniversity of Oxford · GBUniversity of Würzburg · DE

Funding

Medical Research Council MC_UU_00008/8Medical Research Council MC_UU_00025/8
6 · The paper itself

Abstract

Haematopoietic stem cells (HSCs) are normally quiescent, but have evolved mechanisms to respond to stress. Here, we evaluate haematopoietic regeneration induced by chemotherapy. We detect robust chromatin reorganization followed by increased transcription of transposable elements (TEs) during early recovery. TE transcripts bind to and activate the innate immune receptor melanoma differentiation-associated protein 5 (MDA5) that generates an inflammatory response that is necessary for HSCs to exit quiescence. HSCs that lack MDA5 exhibit an impaired inflammatory response after chemotherapy and retain their quiescence, with consequent better long-term repopulation capacity. We show that the overexpression of ERV and LINE superfamily TE copies in wild-type HSCs, but not in Mda5

Indexed as

DNA Transposable ElementsAnimalsCell ProliferationCellular SenescenceChromatin Assembly and DisassemblyEndogenous RetrovirusesEnzyme ActivationHEK293 CellsHematopoiesisHematopoietic Stem CellsHumansInterferon-Induced Helicase, IFIH1LigandsLong Interspersed Nucleotide ElementsMiceMice, Inbred C57BLDNA Transposable ElementsIFIH1 protein, humanInterferon-Induced Helicase, IFIH1LigandsMyeloablative Agonists

Identifiers

PMID34253898
PMCPMC8492473
OpenAlexW3180363056

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.