Evidence map›Paper›PMID 34253727›Full record

ArticleNature communications2021

The Welwitschia genome reveals a unique biology underpinning extreme longevity in deserts.

Tao Wan, Zhiming Liu, Ilia J Leitch, Haiping Xin, Gillian Maggs-Kölling, Yanbing Gong, Zhen Li, Eugene Marais, Yiying Liao, Can Dai and 24 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
6.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 94 citations in OpenAlex.

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  9. Climate change and plant genomic plasticity.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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  13. Convergent Patterns of Karyotype Evolution Underlying Karyotype Uniformity in Conifers.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors at 14 institutions in 6 countries.

Tao WanCore Botanical Gardens/Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China.
Zhiming LiuKey Laboratory of Southern Subtropical Plant Diversity, FairyLake Botanical Garden, Shenzhen & Chinese Academy of Sciences, Shenzhen, China.
Ilia J LeitchRoyal Botanic Gardens, Kew, Surrey, UK.ORCID http://orcid.org/0000-0002-3837-8186
Haiping XinCore Botanical Gardens/Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China.
Gillian Maggs-KöllingGobabeb Research and Training Centre, Walvis Bay, Namibia.
Yanbing GongState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.ORCID http://orcid.org/0000-0002-9450-6162
Zhen LiDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
Eugene MaraisGobabeb Research and Training Centre, Walvis Bay, Namibia.ORCID http://orcid.org/0000-0001-7155-9942
Yiying LiaoKey Laboratory of Southern Subtropical Plant Diversity, FairyLake Botanical Garden, Shenzhen & Chinese Academy of Sciences, Shenzhen, China.
Can DaiSchool of Resources and Environmental Science, Hubei University, Wuhan, China.ORCID http://orcid.org/0000-0003-3914-2041
Fan LiuSino-Africa Joint Research Centre, Chinese Academy of Sciences, Wuhan, China.
Qijia WuSeqhealth Technology, Wuhan, China.
Chi SongInstitute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China.
Yadong ZhouCore Botanical Gardens/Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China.
Weichang HuangShanghai Key Laboratory of Plant Functional Genomics and Resources, Shanghai Chenshan Botanical Garden, Shanghai, China.
Kai JiangShanghai Key Laboratory of Plant Functional Genomics and Resources, Shanghai Chenshan Botanical Garden, Shanghai, China.ORCID http://orcid.org/0000-0001-9795-9290
Qi WangShanghai Key Laboratory of Plant Functional Genomics and Resources, Shanghai Chenshan Botanical Garden, Shanghai, China.
Yong YangCollege of Biology and Environment, Nanjing Forestry University, Nanjing, China.
Zhixiang ZhongCore Botanical Gardens/Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China.
Ming YangKey Laboratory of Southern Subtropical Plant Diversity, FairyLake Botanical Garden, Shenzhen & Chinese Academy of Sciences, Shenzhen, China.
Xue YanCore Botanical Gardens/Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China.
Guangwan HuCore Botanical Gardens/Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China.
Chen HouGuangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, Guangdong Academy of Forestry, Guangzhou, Guangdong, China.ORCID http://orcid.org/0000-0002-8558-5655
Yingjuan SuSchool of Life Sciences, Sun Yat-Sen University, Guangzhou, China.
Shixiu FengKey Laboratory of Southern Subtropical Plant Diversity, FairyLake Botanical Garden, Shenzhen & Chinese Academy of Sciences, Shenzhen, China.
Ji YangEducation Key Laboratory for Biodiversity Science and Ecological Engineering, Fudan University, Shanghai, China.
Jijun YanInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Jinfang ChuInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Fan ChenInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0003-4482-3116
Jinhua RanState Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
Xiaoquan WangState Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing, China. xiaoq_wang@ibcas.ac.cn.ORCID http://orcid.org/0000-0003-3978-0828
Yves Van de PeerDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium. yves.vandepeer@psb.ugent.be.ORCID http://orcid.org/0000-0003-4327-3730
Andrew R LeitchSchool of Biological and Chemical Sciences, Queen Mary University of London, London, UK. a.r.leitch@qmul.ac.uk.ORCID http://orcid.org/0000-0001-8574-302X
Qingfeng WangCore Botanical Gardens/Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China. qfwang@wbgcas.cn.ORCID http://orcid.org/0000-0001-9143-8849
Chinese Academy of Sciences · CNGobabeb Namib Research Institute · NAShanghai Chenshan Plant Science Research Center · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNFudan University · CNGhent University · BEGuangdong Academy of Forestry · CNHubei University · CNNanjing Agricultural University · CNNanjing Forestry University · CNQueen Mary University of London · GBRoyal Botanic Gardens, Kew · GBSun Yat-sen University · CNWuhan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The gymnosperm Welwitschia mirabilis belongs to the ancient, enigmatic gnetophyte lineage. It is a unique desert plant with extreme longevity and two ever-elongating leaves. We present a chromosome-level assembly of its genome (6.8 Gb/1 C) together with methylome and transcriptome data to explore its astonishing biology. We also present a refined, high-quality assembly of Gnetum montanum to enhance our understanding of gnetophyte genome evolution. The Welwitschia genome has been shaped by a lineage-specific ancient, whole genome duplication (~86 million years ago) and more recently (1-2 million years) by bursts of retrotransposon activity. High levels of cytosine methylation (particularly at CHH motifs) are associated with retrotransposons, whilst long-term deamination has resulted in an exceptionally GC-poor genome. Changes in copy number and/or expression of gene families and transcription factors (e.g. R2R3MYB, SAUR) controlling cell growth, differentiation and metabolism underpin the plant's longevity and tolerance to temperature, nutrient and water stress.

Indexed as

Desert ClimateGenome, PlantAfricaCycadopsidaDNA MethylationEvolution, MolecularGeographyMeristemMolecular Sequence AnnotationPlant LeavesRainSequence Analysis, DNASpecies SpecificityTranscriptome

Identifiers

PMID34253727
PMCPMC8275611
OpenAlexW3178142895

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.