Evidence map›Paper›PMID 34252082›Full record

ArticlePLoS genetics2021

Genome mapping coupled with CRISPR gene editing reveals a P450 gene confers avermectin resistance in the beet armyworm.

Yayun Zuo, Yu Shi, Feng Zhang, Fang Guan, Jianpeng Zhang, René Feyereisen, Jeffrey A Fabrick, Yihua Yang, Yidong Wu

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
9.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 145 citations in OpenAlex.

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  11. CRISPR/Cas9-mediated genome editing technique to control fall armyworm (Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Yayun ZuoThe Key Laboratory of Plant Immunity and College of Plant Protection, Nanjing Agricultural University, Nanjing, China.ORCID 0000-0001-9198-4057
Yu ShiThe Key Laboratory of Plant Immunity and College of Plant Protection, Nanjing Agricultural University, Nanjing, China.
Feng ZhangThe Key Laboratory of Plant Immunity and College of Plant Protection, Nanjing Agricultural University, Nanjing, China.ORCID 0000-0002-1371-266X
Fang GuanThe Key Laboratory of Plant Immunity and College of Plant Protection, Nanjing Agricultural University, Nanjing, China.ORCID 0000-0003-0758-1672
Jianpeng ZhangThe Key Laboratory of Plant Immunity and College of Plant Protection, Nanjing Agricultural University, Nanjing, China.ORCID 0000-0002-1904-5124
René FeyereisenDepartment of Plant and Environmental Sciences, University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0002-9560-571X
Jeffrey A FabrickUSDA ARS, U.S. Arid Land Agricultural Research Center, Maricopa, Arizona, United States of America.ORCID 0000-0002-3893-9545
Yihua YangThe Key Laboratory of Plant Immunity and College of Plant Protection, Nanjing Agricultural University, Nanjing, China.
Yidong WuThe Key Laboratory of Plant Immunity and College of Plant Protection, Nanjing Agricultural University, Nanjing, China.ORCID 0000-0003-3456-3373
Nanjing Agricultural University · CNUniversity of Copenhagen · DKU.S. Arid Land Agricultural Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The evolution of insecticide resistance represents a global constraint to agricultural production. Because of the extreme genetic diversity found in insects and the large numbers of genes involved in insecticide detoxification, better tools are needed to quickly identify and validate the involvement of putative resistance genes for improved monitoring, management, and countering of field-evolved insecticide resistance. The avermectins, emamectin benzoate (EB) and abamectin are relatively new pesticides with reduced environmental risk that target a wide number of insect pests, including the beet armyworm, Spodoptera exigua, an important global pest of many crops. Unfortunately, field resistance to avermectins recently evolved in the beet armyworm, threatening the sustainable use of this class of insecticides. Here, we report a high-quality chromosome-level assembly of the beet armyworm genome and use bulked segregant analysis (BSA) to identify the locus of avermectin resistance, which mapped on 15-16 Mbp of chromosome 17. Knockout of the CYP9A186 gene that maps within this region by CRISPR/Cas9 gene editing fully restored EB susceptibility, implicating this gene in avermectin resistance. Heterologous expression and in vitro functional assays further confirm that a natural substitution (F116V) found in the substrate recognition site 1 (SRS1) of the CYP9A186 protein results in enhanced metabolism of EB and abamectin. Hence, the combined approach of coupling gene editing with BSA allows for the rapid identification of metabolic resistance genes responsible for insecticide resistance, which is critical for effective monitoring and adaptive management of insecticide resistance.

Indexed as

AnimalsChromosome MappingClustered Regularly Interspaced Short Palindromic RepeatsCytochrome P-450 Enzyme SystemGene EditingGenomeInsecticide ResistanceInsecticidesIvermectinLarvaSpodopteraavermectinCytochrome P-450 Enzyme Systememamectin benzoateInsecticidesIvermectin

Identifiers

PMID34252082
PMCPMC8297932
OpenAlexW3179699043

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.