Evidence map›Paper›PMID 34251452›Full record

ArticleFEMS microbiology ecology2021

Host species shape the community structure of culturable endophytes in fruits of wild berry species (Vaccinium myrtillus L., Empetrum nigrum L. and Vaccinium vitis-idaea L.).

Minh-Phuong Nguyen, Kaisa Lehosmaa, Françoise Martz, Janne J Koskimäki, Anna Maria Pirttilä, Hely Häggman

Open access · hybridAbstract read
In one paragraph

Article in FEMS microbiology ecology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Naphthoquinone Derivatives fromMolecules (Basel, Switzerland) · 2024
    Article
  8. Review
  9. Article
  10. Soil mycobiome in sustainable agriculture.Frontiers in microbiology · 2022
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Minh-Phuong NguyenEcology and Genetics Research Unit, University of Oulu, FI-90014, P.O. Box 3000, Oulu, Finland.ORCID 0000-0003-3198-7517
Kaisa LehosmaaEcology and Genetics Research Unit, University of Oulu, FI-90014, P.O. Box 3000, Oulu, Finland.
Françoise MartzNatural Resources Institute Finland, Production Systems, Ounasjoentie 6, FI-96200, Rovaniemi, Finland.
Janne J KoskimäkiEcology and Genetics Research Unit, University of Oulu, FI-90014, P.O. Box 3000, Oulu, Finland.
Anna Maria PirttiläEcology and Genetics Research Unit, University of Oulu, FI-90014, P.O. Box 3000, Oulu, Finland.
Hely HäggmanEcology and Genetics Research Unit, University of Oulu, FI-90014, P.O. Box 3000, Oulu, Finland.
University of Oulu · FINatural Resources Institute Finland · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Wild berries are interesting research subjects due to their rich sources of health-beneficial phenolic compounds. However, the internal microbial communities, endophytes, associated with the wild berry fruits are currently unknown. Endophytes are bacteria or fungi inhabiting inside plant tissues, and their functions vary depending on the host species and environmental parameters. The present study aimed to examine community composition of fungal and bacterial endophytes in fruits of three wild berry species (bilberry Vaccinium myrtillus L., lingonberry Vaccinium vitis-idaea L. and crowberry Empetrum nigrum L.) and the effects of host plant species and their growth sites on shaping the endophytic communities. We found that the endophytic community structures differed between the berry species, and fungi were predominant over bacteria in the total endophytic taxa. We identified previously unknown endophytic fungal taxa including Angustimassarina, Dothidea, Fellozyma, Pseudohyphozyma, Hannaella coprosmae and Oberwinklerozyma straminea. A role of soluble phenolic compounds, the intracellular components in wild berry fruits, in shaping the endophytic communities is proposed. Overall, our study demonstrates that each berry species harbors a unique endophytic community of microbes.

Indexed as

Vaccinium myrtillusVaccinium vitis-idaeaBasidiomycotaEndophytesFruitHumansendophytic communitiesfood microbiologyhost-specificmetabolic crosstalkmicrobial ecologysoluble phenolics

Identifiers

PMID34251452
PMCPMC8292141
OpenAlexW3180244599

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.