Evidence map›Paper›PMID 34250572›Full record

ArticleApplied microbiology and biotechnology2021

Antifungal activity of different Xenorhabdus and Photorhabdus species against various fungal phytopathogens and identification of the antifungal compounds from X. szentirmaii.

Harun Cimen, Mustapha Touray, Sebnem Hazal Gulsen, Omer Erincik, Sebastian L Wenski, Helge B Bode, David Shapiro-Ilan, Selcuk Hazir

Abstract read
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In one paragraph

Article in Applied microbiology and biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
8.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 49 citations in OpenAlex.

  1. Evaluation of the Antifungal Potential of DifferentJournal of fungi (Basel, Switzerland) · 2026
    Article
  2. Review
  3. Journal of fungi (Basel, Switzerland) · 2025
    Article
  4. Mitigation of chytridiomycosis onMicrobiology spectrum · 2025
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  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Evaluation of the Antifungal Activities ofJournal of fungi (Basel, Switzerland) · 2022
    Article
  13. Uncovering Nematicidal Natural Products fromJournal of agricultural and food chemistry · 2022
    Article
  14. Article
  15. Biocontrol of strawberry gray mold caused byFrontiers in microbiology · 2022
    Article
  16. Frontiers in microbiology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Harun CimenDepartment of Biology, Faculty of Arts and Science, Aydin Adnan Menderes University, Aydin, Turkey. hcimen@adu.edu.tr.ORCID http://orcid.org/0000-0002-0106-4183
Mustapha TourayDepartment of Biology, Faculty of Arts and Science, Aydin Adnan Menderes University, Aydin, Turkey.
Sebnem Hazal GulsenDepartment of Biology, Faculty of Arts and Science, Aydin Adnan Menderes University, Aydin, Turkey.
Omer ErincikDepartment of Plant Protection, Faculty of Agriculture, Aydin Adnan Menderes University, Aydin, Turkey.
Sebastian L WenskiMolecular Biotechnology, Department of Biosciences, Goethe Universität Frankfurt, Max-von-Laue-Str. 9, D-60438, Frankfurt am Main, Germany.
Helge B BodeMolecular Biotechnology, Department of Biosciences, Goethe Universität Frankfurt, Max-von-Laue-Str. 9, D-60438, Frankfurt am Main, Germany.
David Shapiro-IlanUSDA-ARS, Southeastern Fruit and Tree Nut Research Station, Byron, GA, 31008, USA.
Selcuk HazirDepartment of Biology, Faculty of Arts and Science, Aydin Adnan Menderes University, Aydin, Turkey.
Adnan Menderes University · TRGoethe University Frankfurt · DESoutheastern Fruit and Tree Nut Research Laboratory · US

Funding

Adnan Menderes Üniversitesi Project number: FEF-16003).
6 · The paper itself

Abstract

Xenorhabdus and Photorhabdus spp. are enteric bacterial symbionts of Steinernema and Heterorhabditis nematodes, respectively. These bacteria produce an extensive set of natural products (NPs) with antibacterial, antifungal, antiprotozoal, insecticidal, or other bioactivities when vectored into insect hemocoel by nematodes. We assessed the in vitro activity of different Xenorhabdus and Photorhabdus cell-free supernatants against important fungal phytopathogens, viz., Cryphonectria parasitica, Fusarium oxysporum, Rhizoctonia solani, and Sclerotinia sclerotiorum and identified the bioactive antifungal compound/s present in the most effective bacterial supernatant using the easyPACId (easy promoter-activated compound identification) approach against chestnut blight C. parasitica. Our data showed that supernatants from Xenorhabdus species were comparatively more effective than extracts from Photorhabdus in suppressing the fungal pathogens; among the bacteria assessed, Xenorhabdus szentirmaii was the most effective species against all tested phytopathogens especially against C. parasitica. Subsequent analysis revealed fabclavines as antifungal bioactive compounds in X. szentirmaii, generated by a polyketide synthase (PKS) and non-ribosomal peptide synthetase (NRPS) hybrid system. Fabclavines are broad-spectrum, heat-stable NPs that have great potential as biological control compounds against fungal plant pathogens. More studies are needed to assess the potential phytotoxicity of these compounds and their effects on non-target organisms before commercialization. KEY POINTS: • Chemical fungicides have toxic effects on humans and other non-target organisms. • Alternatives with novel modes of action to supplant current fungicide are needed. • A novel bioactive antifungal compound from Xenorhabdus szentirmaii was identified.

Indexed as

PhotorhabdusXenorhabdusAnimalsAntifungal AgentsAscomycotaFusariumHumansPlant DiseasesRhizoctoniaSymbiosisAntifungal AgentsAntifungalChestnut blightCryphonectria parasiticaFabclavinesXenorhabdus

Identifiers

PMID34250572
OpenAlexW3178125815

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.