Evidence map›Paper›PMID 34250406›Full record

ArticleJCO precision oncology2021

Multigene Panel Testing in Individuals With Hepatocellular Carcinoma Identifies Pathogenic Germline Variants.

Anya Mezina, Neil Philips, Zoe Bogus, Noam Erez, Rui Xiao, Ruoming Fan, Kim M Olthoff, K Rajender Reddy, N Jewel Samadder, Sarah M Nielsen and 7 more

Open access · hybridAbstract read
In one paragraph

Article in JCO precision oncology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
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  3. Article
  4. Article
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  9. Cellular origins of regenerating liver and hepatocellular carcinoma.JHEP reports : innovation in hepatology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Anya MezinaDepartment of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.
Neil PhilipsDepartment of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.
Zoe BogusDepartment of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.
Noam ErezDepartment of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.
Rui XiaoDepartment of Biostatistics, Epidemiology and Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.
Ruoming FanDepartment of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.
Kim M OlthoffDepartment of Surgery, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.
K Rajender ReddyDepartment of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.ORCID 0000-0002-4898-7778
N Jewel SamadderMayo Clinic, Phoenix, AZ.ORCID 0000-0001-7182-5569
Sarah M NielsenInvitae Corp, San Francisco, CA.
Kathryn E HatchellInvitae Corp, San Francisco, CA.ORCID 0000-0003-0849-7018
Edward D EsplinInvitae Corp, San Francisco, CA.ORCID 0000-0001-9205-3756
Anil K RustgiDivision of Digestive and Liver Diseases, Department of Medicine, Herbert Irving Comprehensive Cancer Center, Columbia University Irving Medical Center, New York, NY.
Bryson W KatonaDepartment of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.ORCID 0000-0001-8186-9119
Maarouf A HoteitDepartment of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.
Katherine L NathansonDepartment of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.ORCID 0000-0002-6740-0901
Kirk J WangensteenDepartment of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA.ORCID 0000-0001-6042-6490
University of Pennsylvania · USInvitae (United States) · USAbramson Cancer CenterColumbia University Irving Medical Center · USMayo Clinic Hospital · US

Funding

TRANSGENIC AND CHIMERIC MOUSE COREP30DK050306 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI REBECCA G WELLS · 1997 to 2026
$32.5M
Elucidation of TNFR pathway components that regulate liver repopulationR03DK123543 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI WANGENSTEEN, KIRK J · 2020 to 2021
$243k
NIDDK NIH HHS P30 DK050306NIDDK NIH HHS R03 DK123543
6 · The paper itself

Abstract

Hepatocellular carcinoma (HCC) has well-defined environmental risk factors. In addition, epidemiologic studies have suggested hereditary risk factors. The goals of this study were to determine the rate of pathogenic and likely pathogenic (P/LP) germline variants in cancer predisposition genes in patients with HCC, possible enrichment of P/LP variants in particular genes, and potential impact on clinical management. MATERIALS AND

methodsA prospective study at a tertiary medical center enrolled 217 patients with a personal history of HCC. Multigene panel testing was performed for 134 cancer predisposition genes in all patients. The rate of P/LP variants was compared with population rates. A separate retrospective cohort included 219 patients with HCC who underwent testing at a commercial laboratory.

resultsIn the prospective cohort, P/LP germline variants were identified in 25 of 217 patients with HCC (11.5%). Four patients (1.8%) had P/LP variants in the highly penetrant cancer genes

conclusionP/LP germline variants in cancer predisposition genes were detected in 11%-14% of patients with HCC. Inherited genetics should not be overlooked in HCC as there are important implications for precision treatment, future risk of cancers, and familial cancer risk.

Indexed as

AdultAgedAged, 80 and overCarcinoma, HepatocellularCross-Sectional StudiesFemaleGenetic TestingGenetic VariationGerm CellsHumansLiver NeoplasmsMaleMiddle AgedProspective StudiesRetrospective Studies

Identifiers

PMID34250406
PMCPMC8232566
OpenAlexW3171880996

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.