Evidence map›Paper›PMID 34249331›Full record

ArticleF1000Research2021

Recommendations for the FAIRification of genomic track metadata.

Sveinung Gundersen, Sanjay Boddu, Salvador Capella-Gutierrez, Finn Drabløs, José M Fernández, Radmila Kompova, Kieron Taylor, Dmytro Titov, Daniel Zerbino, Eivind Hovig

Abstract read
In one paragraph

Article in F1000Research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Geranium: Multimodal Retrieval of Genomics Data Visualizations.IEEE transactions on visualization and computer graphics · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Resources and tools for rare disease variant interpretation.Frontiers in molecular biosciences · 2023
    Review
  7. Article
  8. GrainGenes: a data-rich repository for small grains genetics and genomics.Database : the journal of biological databases and curation · 2022
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Sveinung GundersenCenter for Bioinformatics, University of Oslo (UiO), Oslo, Norway.ORCID 0000-0001-9888-7954
Sanjay BodduEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.
Salvador Capella-GutierrezLife Sciences Department, Barcelona Supercomputing Center (BSC), Barcelona, Spain.ORCID 0000-0002-0309-604X
Finn DrabløsDepartment of Clinical and Molecular Medicine, NTNU - Norwegian University of Science and Technology, Trondheim, Norway.ORCID 0000-0001-5794-828X
José M FernándezLife Sciences Department, Barcelona Supercomputing Center (BSC), Barcelona, Spain.ORCID 0000-0002-4806-5140
Radmila KompovaCenter for Bioinformatics, University of Oslo (UiO), Oslo, Norway.
Kieron TaylorEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.ORCID 0000-0002-6575-5223
Dmytro TitovCenter for Bioinformatics, University of Oslo (UiO), Oslo, Norway.
Daniel ZerbinoEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.
Eivind HovigCenter for Bioinformatics, University of Oslo (UiO), Oslo, Norway.ORCID 0000-0002-9103-1077

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

EcosystemMetadataGenomeGenomicsSoftwareepigenomicsFAIRfunctional genomicsgenomicsgenomic tracksinteroperabilitymetadatasequence annotations

Identifiers

PMID34249331
PMCPMC8226415

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.