Evidence map›Paper›PMID 34248281›Full record

ArticleNonlinear dynamics2021

Mathematical modelling of the second wave of COVID-19 infections using deterministic and stochastic SIDR models.

Fran Sérgio Lobato, Gustavo Barbosa Libotte, Gustavo Mendes Platt

Abstract read
In one paragraph

Article in Nonlinear dynamics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Fran Sérgio LobatoChemical Engineering Faculty, Federal University of Uberlândia, Uberlândia, Brazil.ORCID 0000-0002-7401-4718
Gustavo Barbosa LibotteNational Laboratory for Scientific Computing, Petrópolis, Brazil.ORCID 0000-0002-4583-6026
Gustavo Mendes PlattGraduate Program in Agroindustrial Systems and Processes, School of Chemistry and Food, Federal University of Rio Grande, Santo Antônio da Patrulha, Brazil.ORCID 0000-0003-0506-2561

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, various countries from across the globe have been facing the second wave of COVID-19 infections. In order to understand the dynamics of the spread of the disease, much effort has been made in terms of mathematical modeling. In this scenario, compartmental models are widely used to simulate epidemics under various conditions. In general, there are uncertainties associated with the reported data, which must be considered when estimating the parameters of the model. In this work, we propose an effective methodology for estimating parameters of compartmental models in multiple wave scenarios by means of a dynamic data segmentation approach. This robust technique allows the description of the dynamics of the disease without arbitrary choices for the end of the first wave and the start of the second. Furthermore, we adopt a time-dependent function to describe the probability of transmission by contact for each wave. We also assess the uncertainties of the parameters and their influence on the simulations using a stochastic strategy. In order to obtain realistic results in terms of the basic reproduction number, a constraint is incorporated into the problem. We adopt data from Germany and Italy, two of the first countries to experience the second wave of infections. Using the proposed methodology, the end of the first wave (and also the start of the second wave) occurred on 166 and 187 days from the beginning of the epidemic, for Germany and Italy, respectively. The estimated effective reproduction number for the first wave is close to that obtained by other approaches, for both countries. The results demonstrate that the proposed methodology is able to find good estimates for all parameters. In relation to uncertainties, we show that slight variations in the design variables can give rise to significant changes in the value of the effective reproduction number. The results provide information on the characteristics of the epidemic for each country, as well as elements for decision-making in the economic and governmental spheres.

Indexed as

Inverse problemMathematical modeling of COVID-19Second waveStochastic modelUncertainty quantification

Identifiers

PMID34248281
PMCPMC8261056

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.