Evidence map›Paper›PMID 34247324›Full record

ArticleInterdisciplinary sciences, computational life sciences2021

RSCMDA: Prediction of Potential miRNA-Disease Associations Based on a Robust Similarity Constraint Learning Method.

Yu ShengPeng, Wang Hong

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Article in Interdisciplinary sciences, computational life sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

2 authors.

Yu ShengPengSchool of Information Science and Engineering, Shandong Normal University, Jinan, 250358, China.
Wang HongSchool of Information Science and Engineering, Shandong Normal University, Jinan, 250358, China. wanghong106@163.com.

Funding

Innovative Research Group Project of the National Natural Science Foundation of China 61672329Innovative Research Group Project of the National Natural Science Foundation of China 62072290Shandong Education Science Plan No.SDYY18058
6 · The paper itself

Abstract

With the rapid development of biotechnology and computer technology, increasing studies have shown that the occurrence of many diseases in the human body is closely related to the dysfunction of miRNA, and the relationship between them has become a new research hotspot. Exploring disease-related miRNAs information provides a new perspective for understanding the etiology and pathogenesis of diseases. In this study, we proposed a new method based on similarity constrained learning (RSCMDA) to infer disease-associated miRNAs. Considering the problems of noise and incomplete information in current biological datasets, we designed a new framework RSCMDA, which can learn a new disease similarity network and miRNA similarity network based on the existing biological information, and then update the predicted miRNA-disease associations using robust similarity constraint learning method. Consequently, the AUC scores obtained in the global and local cross-validation of RSCMDA are 0.9465 and 0.8494, respectively, which are superior to the other methods. Besides, the prediction performance of RSCMDA is further confirmed by the case study on lung Neoplasms, because 94% of the top 50 miRNAs predicted by the RSCMDA method are confirmed from the existing biological databases or research results. All the results show that RSCMDA is a reliable and effective framework, which can be used as new technology to explore the relationship between miRNA and disease.

Indexed as

Lung NeoplasmsMicroRNAsAlgorithmsComputational BiologyGenetic Predisposition to DiseaseHumansMicroRNAsAUCDiseaseLung neoplasmsmiRNASimilarity constrained learning

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.