Evidence map›Paper›PMID 34247322›Full record

ArticleJournal of applied genetics2021

Assessment of natural DNA methylation variation and its association with economically important traits in dolichos bean (Lablab purpureus L. Var. Lignosus) using AMP-PCR assay.

H Ajaykumar, S Ramesh, N C Sunitha, C Anilkumar

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Article in Journal of applied genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

H AjaykumarDepartment of Genetics and Plant Breeding, College of Agriculture, University of Agricultural Sciences, Bangalore, India.
S RameshDepartment of Genetics and Plant Breeding, College of Agriculture, University of Agricultural Sciences, Bangalore, India. ramesh_uasb@rediffmail.com.ORCID http://orcid.org/0000-0001-9666-7974
N C SunithaDepartment of Genetics and Plant Breeding, College of Agriculture, University of Agricultural Sciences, Bangalore, India.ORCID http://orcid.org/0000-0001-9387-4695
C AnilkumarDepartment of Genetics and Plant Breeding, College of Agriculture, University of Agricultural Sciences, Bangalore, India.ORCID http://orcid.org/0000-0002-7359-1249

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As a prelude to exploit DNA methylation-induced variation, we hypothesized the existence of substantial natural DNA methylation variation and its association with economically important traits in dolichos bean, and tested it using amplified methylation polymorphism-polymerase chain reaction (AMP-PCR) assay. DNA methylation patterns such as internal, external, full and non-methylation were amplified in a set of 64 genotypes using 26 customized randomly amplified polymorphic DNA (RAPD) primers containing 5'CCGG3' sequence. The 64 genotypes included 60 germplasm accessions (GA), two advanced breeding lines (ABLs) and two released varieties. The ABLs and released varieties are referred to as improved germplasm accessions (IGA) in this study. The association of DNA methylation patterns with economically important traits such as days to 50% flowering, raceme length, fresh pods plant

Indexed as

DolichosDNA MethylationGenetic VariationPlant BreedingPolymerase Chain ReactionRandom Amplified Polymorphic DNA TechniqueAMP-PCRDNA methylationDolichos beanEpigeneticsIsoschizomers

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.