ArticleBMC ecology and evolution2021
Genome-wide characterization of MATE gene family and expression profiles in response to abiotic stresses in rice (Oryza sativa).
Article in BMC ecology and evolution, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
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Who cites it
24 citing papers in PubMed, 54 citations in OpenAlex.
- Integrative multi-omics analysis reveals the domestication mechanism of black rice.National science review · 2026Article
- Genome-wide bioinformatics analysis of the MATE gene family for abiotic stress tolerance in sunflower (Helianthus annuus L.).PloS one · 2026Article
- Article
- Identification and functional analysis of a gene regulating tolerance to freezing in Brassica Napus L. seedlings using BSA-seq and RNA-seq.BMC plant biology · 2025Article
- Transcriptome profiling of symptomatic vs. asymptomatic grapevine plants reveals candidate genes for plant improvement against trunk diseases.BMC plant biology · 2025Article
- APAV: An advanced pangenome analysis and visualization toolkit.PLoS computational biology · 2025Article
- The G311E Mutant Gene of MATE Family Protein DTX6 Confers Diquat and Paraquat Resistance in Rice Without Yield or Nutritional Penalties.International journal of molecular sciences · 2025Article
- Uncovering the genomic basis of phenological traits inFrontiers in plant science · 2025Article
- In silico analysis of L- and G-type lectin receptor kinases in tomato: evolution, diversity, and abiotic responses.BMC genomics · 2024Article
- Developing an SNP dataset for efficiently evaluating soybean germplasm resources using the genome sequencing data of 3,661 soybean accessions.BMC genomics · 2024Article
- Review
- Characterization of the Fatty Acyl-CoA Reductase (FAR) Gene Family and Its Response to Abiotic Stress in Rice (Plants (Basel, Switzerland) · 2024Article
- Genome-Wide Identification, Expression Analysis under Abiotic Stress and Co-Expression Analysis ofInternational journal of molecular sciences · 2024Article
- Genome-wide mining and characterization of MATE transporters in Coriandrum sativum L.Molecular biology research communications · 2024Article
- Metabolic, transcriptomic, and genetic analyses of candidate genes for seed size in watermelon.Frontiers in plant science · 2024Article
- Identification of thePeerJ · 2024Article
- Physiological and Transcriptomic Analysis Reveals That Melatonin Alleviates Aluminum Toxicity in Alfalfa (International journal of molecular sciences · 2023Article
- Transcriptome profiling, physiological, and biochemical analyses provide new insights towards drought stress response in sugar maple (Frontiers in plant science · 2023Article
- The Role of Transmembrane Proteins in Plant Growth, Development, and Stress Responses.International journal of molecular sciences · 2022Review
- Response of Anthocyanin Accumulation in Pepper (International journal of molecular sciences · 2022Article
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Authors and funding
10 authors at 2 institutions in 1 country.
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Abstract
Multidrug and toxic compound extrusion (MATE) proteins are involved in many physiological functions of plant growth and development. Although an increasing number of MATE proteins have been identified, the understanding of MATE proteins is still very limited in rice. In this study, 46 MATE proteins were identified from the rice (Oryza sativa) genome by homology searches and domain prediction. The rice MATE family was divided into four subfamilies based on the phylogenetic tree. Tandem repeats and fragment replication contribute to the expansion of the rice MATE gene family. Gene structure and cis-regulatory elements reveal the potential functions of MATE genes. Analysis of gene expression showed that most of MATE genes were constitutively expressed and the expression patterns of genes in different tissues were analyzed using RNA-seq. Furthermore, qRT-PCR-based analysis showed differential expression patterns in response to salt and drought stress. The analysis results of this study provide comprehensive information on the MATE gene family in rice and will aid in understanding the functional divergence of MATE genes.
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