Evidence map›Paper›PMID 34243706›Full record

ArticleBMC genomics2021

Trehalose in pine wood nematode participates in DJ3 formation and confers resistance to low-temperature stress.

Qiaoli Chen, Ruizhi Zhang, Danlei Li, Feng Wang, Shengwei Jiang, Jianan Wang

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  3. Identification and Transcriptome Analysis ofInternational journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Qiaoli Chen *Key Laboratory of Alien Forest Pests Monitoring and Control-Heilongjiang Province, School of Forestry, Northeast Forestry University, 150040, Harbin, Heilongjiang, P. R. China.
Ruizhi Zhang *Key Laboratory of Alien Forest Pests Monitoring and Control-Heilongjiang Province, School of Forestry, Northeast Forestry University, 150040, Harbin, Heilongjiang, P. R. China.
Danlei LiKey Laboratory of Alien Forest Pests Monitoring and Control-Heilongjiang Province, School of Forestry, Northeast Forestry University, 150040, Harbin, Heilongjiang, P. R. China.
Feng WangKey Laboratory of Alien Forest Pests Monitoring and Control-Heilongjiang Province, School of Forestry, Northeast Forestry University, 150040, Harbin, Heilongjiang, P. R. China. kingsummit@126.com.
Shengwei Jiang *Station of Forest and Grassland Pest Control and Quarantine, 110001, Shenyang, Liaoning, P. R. China.
Jianan WangKey Laboratory of Alien Forest Pests Monitoring and Control-Heilongjiang Province, School of Forestry, Northeast Forestry University, 150040, Harbin, Heilongjiang, P. R. China.
Northeast Forestry University · CN

Funding

china postdoctoral science foundation 2020M681066, 2021T140101Fundamental Research Funds for the Central Universities 2572019CP11Key Research and Development Funds of Liaoning Province 2019JH2/1020001Key Technologies Research and Development Program 2018YFC1200400National Natural Science Foundation of China 31971656
6 · The paper itself

Abstract

backgroundRecently, pine wood nematode (PWN, Bursaphelenchus xylophilus) has been found in the extreme cold area of northeast China. The third-stage dispersal juvenile (DJ3) of PWN, which is a long-lived stress-resistant stage, plays an important role in the process of PWN spreading to low-temperature areas, as this stage can survive under unfavorable conditions.

resultsWeighted correlation network analysis (WGCNA) was used to analyze the expression patterns of 15,889 genes included in 21 RNA-Seq results of PWN at DJ3 and the other 6 different stages, and a total of 12 coexpression modules were obtained. Among them, the magenta module has the highest correlation with DJ3, which included a total of 652 genes. KEGG enrichment analysis showed that most of the genes in the magenta module were involved in metabolic processes, which were related to autophagy and longevity regulation. These pathways included starch and sucrose metabolism, which contains trehalose metabolism. To explore the function of trehalose in DJ3 formation and survival under - 20 °C, a trehalose-6-phosphate synthase encoding gene (Bx-tps), a trehalose-6-phosphate phosphatase encoding gene (Bx-tpp) and 7 trehalase encoding genes (Bx-tres) were identified and investigated. The expression of these 9 genes was related to the formation of DJ3. A treatment under - 20 °C induced the accumulation of trehalose. The survival rate of DJ3 at -20 °C reduced after silencing of any of these trehalose metabolism genes. Further analysis suggested that two trehalose synthesis genes were highly correlated with DJ3 and might be involved in autophagy by regulating with energy conversion related genes.

conclusionsThe above results indicated that trehalose metabolism promotes DJ3 formation and helps DJ3 survive at -20 °C. Although trehalose accumulation is favorable for DJ3 to cope with low-temperature stress, multiple trehalose metabolism genes need to work together. There may be a multi-path regulated physiological process involving trehalose synthesis genes under low-temperature stress resistance. This physiological process may regulate the formation and maintenance of DJ3 through autophagy and energy conversion.

Indexed as

PinusTylenchidaAnimalsChinaTemperatureTrehaloseTrehaloseLow-temperature resistancePine wilt diseasePine wood nematodeThird-stage dispersal juvenileTrehalose

Identifiers

PMID34243706
PMCPMC8268229
OpenAlexW3181535893

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.