Evidence map›Paper›PMID 34242617›Full record

ArticleStem cell reports2021

The histone H3.3 chaperone HIRA restrains erythroid-biased differentiation of adult hematopoietic stem cells.

Rebecca L Murdaugh, Kevin A Hoegenauer, Ayumi Kitano, Matthew V Holt, Matthew C Hill, Xiangguo Shi, Jonathan F Tiessen, Richard Chapple, Tianyuan Hu, Yu-Jung Tseng and 4 more

Open access · goldAbstract read
In one paragraph

Article in Stem cell reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  4. HIRA and dPCIF1 coordinately establish totipotent chromatin and control orderly ZGA inProceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Rebecca L MurdaughGraduate Program in Developmental Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Kevin A HoegenauerDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Ayumi KitanoDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Matthew V HoltGraduate Program in Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA; Verna & Marrs McLean Department of Biochemistry & Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Matthew C HillGraduate Program in Developmental Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Xiangguo ShiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Jonathan F TiessenGraduate Program in Developmental Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Richard ChappleDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Tianyuan HuDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Yu-Jung TsengGraduate Program in Translational Biology and Molecular Medicine, Baylor College of Medicine, Houston, TX 77030, USA.
Angelique LinDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
James F MartinGraduate Program in Developmental Biology, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular Physiology and Biophysics, Baylor College of Medicine, Houston, TX 77030, USA; Texas Heart Institute, Houston, TX 77030, USA.
Nicolas L YoungGraduate Program in Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA; Verna & Marrs McLean Department of Biochemistry & Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Daisuke NakadaGraduate Program in Developmental Biology, Baylor College of Medicine, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Graduate Program in Translational Biology and Molecular Medicine, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address: nakada@bcm.edu.
Baylor College of Medicine · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
Virology CoreP30AI036211 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI KOZINETZ, CLAUDIA A. · 1994 to 2015
$21.7M
Pitx2 in atrial fibrillationR01HL118761 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI MARTIN, JAMES F · 2014 to 2025
$6.1M
METABOLIC REGULATION IN LEUKEMIA-INITIATING CELLSR01CA193235 · NCI · BAYLOR COLLEGE OF MEDICINE · PI NAKADA, DAISUKE · 2015 to 2024
$4.6M
Hippo and Wnt Signaling in Cardiac RegenerationR01HL127717 · NHLBI · TEXAS HEART INSTITUTE · PI MARTIN, JAMES F · 2016 to 2023
$4.4M
Optical elastography for assessment of myocardial regenerationR01HL130804 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI LARIN, KIRILL V, MARTIN, JAMES F · 2016 to 2019
$2.9M
Mesenchymal Stromal Cells Regulate Hematopoietic Stem Cell AgingR01DK107413 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI NAKADA, DAISUKE · 2016 to 2020
$2.2M
Neutron encoded activity based probesR01GM139295 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI YOUNG, DAMIAN WINSTON, YOUNG, NICOLAS L · 2020 to 2024
$2.2M
BD Biosciences Special Order LSRIIS10RR024574 · NCRR · BAYLOR COLLEGE OF MEDICINE · PI LUMPKIN, ELLEN A · 2009 to 2009
$430k
The Role of Histone Variant H3.3 Regulation by Hira in HematopoiesisF31DK112542 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI MURDAUGH, REBECCA LAUREN · 2017 to 2020
$179k
The transcriptional landscapes and cell states of regenerative cardiomyocytesF31HL136065 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI HILL, MATTHEW CRAIG · 2017 to 2019
$134k
NCI NIH HHS P30 CA125123NCI NIH HHS R01 CA193235NCRR NIH HHS S10 RR024574NHLBI NIH HHS F31 HL136065NHLBI NIH HHS R01 HL118761NHLBI NIH HHS R01 HL127717NHLBI NIH HHS R01 HL130804NIAID NIH HHS P30 AI036211NIDDK NIH HHS F31 DK112542NIDDK NIH HHS R01 DK107413NIGMS NIH HHS R01 GM139295
6 · The paper itself

Abstract

Histone variants contribute to the complexity of the chromatin landscape and play an integral role in defining DNA domains and regulating gene expression. The histone H3 variant H3.3 is incorporated into genic elements independent of DNA replication by its chaperone HIRA. Here we demonstrate that Hira is required for the self-renewal of adult hematopoietic stem cells (HSCs) and to restrain erythroid differentiation. Deletion of Hira led to rapid depletion of HSCs while differentiated hematopoietic cells remained largely unaffected. Depletion of HSCs after Hira deletion was accompanied by increased expression of bivalent and erythroid genes, which was exacerbated upon cell division and paralleled increased erythroid differentiation. Assessing H3.3 occupancy identified a subset of polycomb-repressed chromatin in HSCs that depends on HIRA to maintain the inaccessible, H3.3-occupied state for gene repression. HIRA-dependent H3.3 incorporation thus defines distinct repressive chromatin that represses erythroid differentiation of HSCs.

Indexed as

Adult Stem CellsAge FactorsAnimalsAnimals, NewbornCell Cycle ProteinsCell DifferentiationCell Self RenewalErythroid CellsGene Expression ProfilingGene OntologyHematopoiesisHematopoietic Stem CellsHistone ChaperonesHistonesMiceMice, Inbred C57BLCell Cycle ProteinsHira protein, mouseHistone ChaperonesHistonesTranscription Factorsdifferentiationepigeneticserythropoiesishematopoiesishematopoietic stem cellHirahistone H3.3polycomb

Identifiers

PMID34242617
PMCPMC8365107
OpenAlexW3180384359

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.