Evidence map›Paper›PMID 34242344›Full record

ArticlePloS one2021

QTL mapping of seedling tolerance to exposure to low temperature in the maize IBM RIL population.

Raeann Goering, Siri Larsen, Jia Tan, James Whelan, Irina Makarevitch

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Interplay between auxin and abiotic stresses in maize.Journal of experimental botany · 2025
    Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Silicon-Induced Morphological, Biochemical and Molecular Regulation inInternational journal of molecular sciences · 2023
    Article
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  11. Review
  12. Review
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  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Raeann GoeringDepartment of Biology, Hamline University, Saint Paul, Minnesota, United States of America.ORCID 0000-0002-0351-335X
Siri LarsenDepartment of Biology, Hamline University, Saint Paul, Minnesota, United States of America.
Jia TanDepartment of Biology, Hamline University, Saint Paul, Minnesota, United States of America.
James WhelanDepartment of Biology, Hamline University, Saint Paul, Minnesota, United States of America.
Irina MakarevitchDepartment of Biology, Hamline University, Saint Paul, Minnesota, United States of America.ORCID 0000-0002-0767-5719
Hamline University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Maize is a cold sensitive crop that exhibits severe retardation of growth and development when exposed to cold spells during and right after germination, including the slowdown in development of new leaves and in formation of the photosynthetic apparatus. Improving cold tolerance in maize would allow early sowing to improve crop yield by prolonging a growing season and by decreasing the negative effects of summer drought, diseases, and pests. Two maize inbreds widely incorporated into American maize germplasm, B73 and Mo17, exhibit different levels of tolerance to low temperature exposure at seedling stage. In addition, thirty seven diverse inbred maize lines showed large variation for seedling response to low temperature exposure with lines with extremely low tolerance to seedling exposure to low temperatures falling into stiff stalk, non-stiff stalk, and tropical clades. We employed the maize intermated B73×Mo17 (IBM) recombinant inbred line population (IBM Syn4 RIL) to investigate the genetic architecture of cold stress tolerance at a young seedling stage and to identify quantitative trait loci (QTLs) controlling this variation. A panel of 97 recombinant inbred lines of IBM Syn4 were used to measure, and score based on several traits related to chlorophyll concentration, leaf color, and tissue damage. Our analysis resulted in detection of two QTLs with high additive impact, one on chromosome 1 (bin 1.02) and second on chromosome 5 (bin 5.05). Further investigation of the QTL regions using gene expression data provided a list of the candidate genes likely contributing to the variation in cold stress response. Among the genes located within QTL regions identified in this study and differentially expressed in response to low temperature exposure are the genes with putative functions related to auxin and gibberellin response, as well as general abiotic stress response, and genes coding for proteins with broad regulatory functions.

Indexed as

Chromosome MappingCold TemperatureQuantitative Trait LociSeedlingsZea maysGene Expression Regulation, PlantPhenotypeStress, Physiological

Identifiers

PMID34242344
PMCPMC8270210
OpenAlexW3180113260

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.