Evidence map›Paper›PMID 34239923›Full record

ArticleBioMed research international2021

PLOD3 Is Associated with Immune Cell Infiltration and Genomic Instability in Colon Adenocarcinoma.

Xianyu Deng, Yun Pan, Muqing Yang, Ying Liu, Jiyu Li

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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  3. RBM15 increase tumor-infiltrating CD4+ T cell in ESCCAmerican journal of cancer research · 2024
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  7. A FeFrontiers in molecular biosciences · 2022
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Xianyu DengColorectal Cancer Center, Tenth People's Hospital of Tongji University, Tongji University School of Medicine, China.ORCID https://orcid.org/0000-0002-8967-1200
Yun PanColorectal Cancer Center, Tenth People's Hospital of Tongji University, Tongji University School of Medicine, China.
Muqing YangCenter for Difficult and Complicated Abdominal Surgery, Tenth People's Hospital of Tongji University, Tongji University School of Medicine, China.
Ying LiuDepartment of General Surgery, Tenth People's Hospital of Tongji University, Tongji University School of Medicine, China.
Jiyu LiColorectal Cancer Center, Tenth People's Hospital of Tongji University, Tongji University School of Medicine, China.ORCID https://orcid.org/0000-0002-2529-2914
Tongji University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Procollagen-lysine, 2-oxoglutarate 5-dioxygenases (PLODs) are a family of enzymes. However, the clinical and functional roles of PLOD3 in colon adenocarcinoma (COAD) have not been investigated. The present study found that PLOD3 was highly upregulated in COAD, which may be resulted from its aberrant DNA methylation. The upregulation of both PLOD3 mRNA and protein was confirmed in our tissue samples. Moreover, high PLOD3 was identified to be associated with unfavorable prognosis in COAD. As genome instability is a hallmark of cancer, PLOD3 was expressed higher in COAD samples with high chromosomal instability (CIN-high) than those with low CIN (CIN-low) and higher in those with low MSI than high MSI, indicating that PLOD3 expression was associated with tumor genomic instability. Furthermore, immune cells showed significantly different infiltrating levels between the high and low PLOD3 expression groups, and the immune score was negatively correlated with PLOD3 expression and higher in samples with low PLOD3 expression, suggesting that high PLOD3 expression was associated with reduced immune cell infiltrating levels in COAD. To further uncover the underlying mechanism of PLOD3 in PLOD3, we compared the COAD samples of high PLOD3 expression with those of low PLOD3 expression and found that high expression of PLOD3 was associated with reduced expression of immune regulators and enhanced activities of two tumor-promoting pathways, including gluconeogenesis and TGF-beta signaling in epithelial-mesenchymal transition (EMT), suggesting that high expression of PLOD3 causes poor prognosis in COAD by weakening the immune cell infiltration and enhancing activities of tumor-promoting pathways. In summary, the present study highlights the importance of PLOD3 and provides the evidence about the functional role of PLOD3 in COAD.

Indexed as

Gene Expression Regulation, NeoplasticAdenocarcinomaColonic NeoplasmsDatabases, FactualEpithelial-Mesenchymal TransitionGene Expression ProfilingGenomic InstabilityGluconeogenesisHumansImmune SystemProcollagen-Lysine, 2-Oxoglutarate 5-DioxygenasePrognosisSignal TransductionTransforming Growth Factor betaTumor MicroenvironmentUp-RegulationPLOD3 protein, humanProcollagen-Lysine, 2-Oxoglutarate 5-DioxygenaseTransforming Growth Factor beta

Identifiers

PMID34239923
PMCPMC8235962
OpenAlexW3174078085

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.