Evidence map›Paper›PMID 34239500›Full record

ArticleFrontiers in endocrinology2021

Discovery Genome-Wide Association Study of Body Composition in 4,386 Adults From the UK Biobank's Pilot Imaging Enhancement Study.

Katherine M Livingstone, Mun Hua Tan, Gavin Abbott, Rachel L Duckham, Larry Croft, Joey Ward, Mark McEvoy, Michelle A Keske, Christopher Austin, Steven J Bowe

Open access · goldAbstract read
In one paragraph

Article in Frontiers in endocrinology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  3. Review
  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Katherine M LivingstoneInstitute for Physical Activity and Nutrition, School of Exercise and Nutrition Sciences, Deakin University, Geelong, VIC, Australia.
Mun Hua TanDepartment of Microbiology and Immunology, Bio21 Institute, University of Melbourne, Melbourne, VIC, Australia.
Gavin AbbottInstitute for Physical Activity and Nutrition, School of Exercise and Nutrition Sciences, Deakin University, Geelong, VIC, Australia.
Rachel L DuckhamInstitute for Physical Activity and Nutrition, School of Exercise and Nutrition Sciences, Deakin University, Geelong, VIC, Australia.
Larry CroftSchool of Life and Environmental Sciences, Deakin Genomics Centre, Deakin University, Geelong, VIC, Australia.
Joey WardInstitute of Health and Wellbeing, University of Glasgow, Glasgow, United Kingdom.
Mark McEvoyLa Trobe Rural Health School, College of Science, Health and Engineering, La Trobe University, Bendigo, VIC, Australia.
Michelle A KeskeInstitute for Physical Activity and Nutrition, School of Exercise and Nutrition Sciences, Deakin University, Geelong, VIC, Australia.
Christopher AustinSchool of Life and Environmental Sciences, Deakin Genomics Centre, Deakin University, Geelong, VIC, Australia.
Steven J BoweDeakin Biostatistics Unit, Deakin University, Geelong, VIC, Australia.
Deakin University · AUAustralian Institute for Musculoskeletal Science · AULa Trobe University · AUUniversity of Glasgow · GBUniversity of Melbourne · AU

Funding

Medical Research Council MC_PC_17228Medical Research Council MC_QA137853
6 · The paper itself

Abstract

Body composition (fat, skeletal muscle and bone mass) is an important determinant of overall health and risk of endocrine disorders such as type 2 diabetes and osteoporosis. Although diet and physical activity are strongly implicated, body composition is also heritable. We conducted a discovery genome-wide association study on 31 phenotypes from the three-compartment body composition model (fat, lean and bone mass) in a set of 4 386 individuals (n = 2 109 males, n = 2 294 females) from the UK Biobank pilot imaging enhancement program that underwent a dual energy X-ray absorptiometry (DXA) scan for assessment of body composition and genetic screening. From 6 137 607 imputed single nucleotide polymorphisms (SNPs) we identified 17 body composition loci (P<5.0 x 10-8). GWAS from the combined dataset identified four statistically significant SNPs (rs7592270, rs145972737, rs13212044, rs77772562). In sex-stratified GWAS, 10 male specific SNPs across all traits were identified and five female specific SNPs. Of the 17 SNPs, six were in or close to a gene where there was a plausible functional connection. Three SNPs (rs7592270, rs77772562 and rs7552312) were correlated with obesity phenotypes, one SNP (rs2236705) with lean phenotypes and two with bone mass phenotypes (rs112098641 and rs113380185). These results highlight candidate genes and biological pathways related to body composition, including glucose metabolism and estrogen regulation, that are of interest to replicate in future studies.

Indexed as

Models, BiologicalAdipose TissueAdultAgedBiological Specimen BanksBody CompositionBone DensityFemaleGenome-Wide Association StudyHumansMaleMiddle AgedMuscle, SkeletalPolymorphism, Single NucleotideUnited Kingdombody compositionbone massdual energy X-ray absorptiometryfat massgeneticsgenome-wide association studylean massloci

Identifiers

PMID34239500
PMCPMC8259458
OpenAlexW3174617176

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.