Evidence map›Paper›PMID 34239433›Full record

ArticleFrontiers in neuroinformatics2021

FlywheelTools: Data Curation and Manipulation on the Flywheel Platform.

Tinashe M Tapera, Matthew Cieslak, Max Bertolero, Azeez Adebimpe, Geoffrey K Aguirre, Ellyn R Butler, Philip A Cook, Diego Davila, Mark A Elliott, Sophia Linguiti and 4 more

Abstract read
In one paragraph

Article in Frontiers in neuroinformatics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Tractometry of Human Visual White Matter Pathways in Health and Disease.Magnetic resonance in medical sciences : MRMS : an official journal of Japan Society of Magnetic Resonance in Medicine · 2024
    Review
  5. Article
  6. Article
  7. aXonica: A support package for MRI based Neuroimaging.Biotechnology notes (Amsterdam, Netherlands) · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Tinashe M TaperaPenn Lifespan Informatics & Neuroimaging Center, University of Pennsylvania, Philadelphia, PA, United States.
Matthew CieslakPenn Lifespan Informatics & Neuroimaging Center, University of Pennsylvania, Philadelphia, PA, United States.
Max BertoleroPenn Lifespan Informatics & Neuroimaging Center, University of Pennsylvania, Philadelphia, PA, United States.
Azeez AdebimpePenn Lifespan Informatics & Neuroimaging Center, University of Pennsylvania, Philadelphia, PA, United States.
Geoffrey K AguirreDepartment of Neurology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States.
Ellyn R ButlerPenn Lifespan Informatics & Neuroimaging Center, University of Pennsylvania, Philadelphia, PA, United States.
Philip A CookDepartment of Radiology, University of Pennsylvania, Philadelphia, PA, United States.
Diego DavilaPenn Lifespan Informatics & Neuroimaging Center, University of Pennsylvania, Philadelphia, PA, United States.
Mark A ElliottDepartment of Radiology, University of Pennsylvania, Philadelphia, PA, United States.
Sophia LinguitiPenn Lifespan Informatics & Neuroimaging Center, University of Pennsylvania, Philadelphia, PA, United States.
Kristin MurthaPenn Lifespan Informatics & Neuroimaging Center, University of Pennsylvania, Philadelphia, PA, United States.
William TackettDepartment of Neurology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States.
John A DetreDepartment of Neurology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States.
Theodore D SatterthwaitePenn Lifespan Informatics & Neuroimaging Center, University of Pennsylvania, Philadelphia, PA, United States.

Funding

Scientific TransparencyP30EY001583 · NEI · UNIVERSITY OF PENNSYLVANIA · PI CLAIRE H MITCHELL · 1985 to 2026
$19.5M
Longitudinal Mapping of Network Development Underlying Executive Dysfunction in AdolescenceR01MH113550 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI Danielle Smith Bassett, Theodore Satterthwaite · 2018 to 2026
$6.9M
Inter-modal Coupling Image AnalyticsR01MH112847 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI Theodore Satterthwaite, Russell Takeshi Shinohara · 2017 to 2026
$5.9M
Reproducible imaging-based brain growth charts for psychiatryR01MH120482 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI MILHAM, MICHAEL PETER, SATTERTHWAITE, THEODORE · 2019 to 2023
$3.5M
Network Control and Functional Context: Mechanisms for TMS ResponseRF1MH116920 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI BASSETT, DANIELLE SMITH, OATHES, DESMOND · 2018 to 2018
$2.8M
Biomedical Image Computing and Informatics ClusterS10OD023495 · OD · UNIVERSITY OF PENNSYLVANIA · PI DAVATZIKOS, CHRISTOS · 2017 to 2017
$1.9M
NEI NIH HHS P30 EY001583NIH HHS S10 OD023495NIMH NIH HHS R01 MH112847NIMH NIH HHS R01 MH113550NIMH NIH HHS R01 MH120482NIMH NIH HHS RF1 MH116920
6 · The paper itself

Abstract

The recent and growing focus on reproducibility in neuroimaging studies has led many major academic centers to use cloud-based imaging databases for storing, analyzing, and sharing complex imaging data. Flywheel is one such database platform that offers easily accessible, large-scale data management, along with a framework for reproducible analyses through containerized pipelines. The Brain Imaging Data Structure (BIDS) is the

Indexed as

BIDScurationFlywheelneuroimagingneuroinformatics

Identifiers

PMID34239433
PMCPMC8258420

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.