Evidence map›Paper›PMID 34239169›Full record

ArticleLimnology and oceanography2021

Spatial variability of prokaryotic and viral abundances in the Kermadec and Atacama Trench regions.

Clemens Schauberger, Mathias Middelboe, Morten Larsen, Logan M Peoples, Douglas H Bartlett, Finn Kirpekar, Ashley A Rowden, Frank Wenzhöfer, Bo Thamdrup, Ronnie N Glud

Abstract read
In one paragraph

Article in Limnology and oceanography, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Bioturbation in the hadal zone.Nature communications · 2025
    Article
  9. Article
  10. Article
  11. The Expanding Diversity of Viruses from Extreme Environments.International journal of molecular sciences · 2024
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Anammox bacteria drive fixed nitrogen loss in hadal trench sediments.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Clemens SchaubergerDepartment of Biology, Nordcee and HADAL University of Southern Denmark Odense Denmark.ORCID https://orcid.org/0000-0002-2097-4959
Mathias MiddelboeDepartment of Biology, Nordcee and HADAL University of Southern Denmark Odense Denmark.ORCID https://orcid.org/0000-0002-9587-9171
Morten LarsenDepartment of Biology, Nordcee and HADAL University of Southern Denmark Odense Denmark.ORCID https://orcid.org/0000-0002-5579-0252
Logan M PeoplesMarine Biology Research Division, Scripps Institution of Oceanography University of California San Diego La Jolla California USA.ORCID https://orcid.org/0000-0002-0163-2769
Douglas H BartlettMarine Biology Research Division, Scripps Institution of Oceanography University of California San Diego La Jolla California USA.ORCID https://orcid.org/0000-0002-8385-1139
Finn KirpekarDepartment of Biochemistry and Molecular Biology University of Southern Denmark Odense M Denmark.ORCID https://orcid.org/0000-0003-1901-2266
Ashley A RowdenNational Institute of Water and Atmospheric Research Wellington New Zealand.ORCID https://orcid.org/0000-0003-2975-2524
Frank WenzhöferAlfred Wegener Institute, Helmholtz Center for Polar and Marine Research Bremerhaven Germany.ORCID https://orcid.org/0000-0002-4621-0586
Bo ThamdrupDepartment of Biology, Nordcee and HADAL University of Southern Denmark Odense Denmark.ORCID https://orcid.org/0000-0002-1221-7077
Ronnie N GludDepartment of Biology, Nordcee and HADAL University of Southern Denmark Odense Denmark.ORCID https://orcid.org/0000-0002-7069-893X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hadal trenches represent the deepest part of the ocean and are dynamic depocenters with intensified prokaryotic activity. Here, we explored the distribution and drivers of prokaryotic and viral abundance from the ocean surface and 40 cm into sediments in two hadal trench regions with contrasting surface productivity. In the water column, prokaryotic and viral abundance decreased with water depth before reaching a rather stable level at ~ 4000 m depth at both trench systems, while virus to prokaryote ratios were increasing with depth, presumably reflecting the declining availability of organic material. Prokaryotic and viral abundances in sediments were lower at the adjacent abyssal sites than at the hadal sites and declined exponentially with sediment depth, closely tracking the attenuation of total organic carbon (TOC) content. In contrast, hadal sediment exhibited erratic depth profiles of prokaryotes and viruses with many subsurface peaks. The prokaryotic abundance correlated well to extensive fluctuations in TOC content at centimeter scale, which were likely caused by recurring mass wasting events. Yet while prokaryotic and viral abundances cross correlated well in the abyssal sediments, there was no clear correlation in the hadal sites. The results suggested that dynamic depositional conditions and higher substrate availability result in a high spatial heterogeneity in viral and prokaryotic abundances in hadal sediments in comparison to more stable abyssal settings. We argue that these conditions enhance the relatively importance of viruses for prokaryotic mortality and carbon recycling in hadal settings.

Identifiers

PMID34239169
PMCPMC8248377

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.