ArticleMethods in molecular biology (Clifton, N.J.)2021
Protein Subcellular Localization Prediction.
Article in Methods in molecular biology (Clifton, N.J.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed.
- Genome-wide characterization of HSP70 and HSP90 subfamilies in Yak (Bos grunniens): expression patterns under cold and chemical hypoxia conditions.Mammalian genome : official journal of the International Mammalian Genome Society · 2026Article
- Genome-Wide Analysis of theInternational journal of molecular sciences · 2025Article
- Impact of Alignments on the Accuracy of Protein Subcellular Localization Predictions.Proteins · 2025Article
- Article
- Protein subcellular localization prediction tools.Computational and structural biotechnology journal · 2024Review
- SCLpred-ECL: Subcellular Localization Prediction by Deep N-to-1 Convolutional Neural Networks.International journal of molecular sciences · 2024Article
- Multi-omics identification of a key glycosyl hydrolase gene FtGH1 involved in rutin hydrolysis in Tartary buckwheat (Fagopyrum tataricum).Plant biotechnology journal · 2024Article
- Genome-wide identification of the E-class gene family in wheat: evolution, expression, and interaction.Frontiers in plant science · 2024Article
- Recent Advances in the Prediction of Subcellular Localization of Proteins and Related Topics.Frontiers in bioinformatics · 2022Review
Corrections and comments
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Authors and funding
3 authors.
Funding
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Abstract
The elucidation of the subcellular localization of proteins is very important in order to deeply understand their functions. In fact, proteins activities are strictly correlated to the cellular compartment and microenvironment in which they are present.In recent years, several effective and reliable proteomics techniques and computational methods have been developed and implemented in order to identify the proteins subcellular localization. This process is often time-consuming and expensive, but the recent technological and bioinformatics progress allowed the development of more accurate and simple workflows to determine the localization, interactions, and functions of proteins.In the following chapter, a brief introduction on the importance of knowing subcellular localization of proteins will be presented. Then, sample preparation protocols, proteomic methods, data analysis strategies, and software for the prediction of proteins localization will be presented and discussed. Finally, the more recent and advanced spatial proteomics techniques will be shown.
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