Evidence map›Paper›PMID 34235521›Full record

ArticleChemical communications (Cambridge, England)2021

RNA diversification by a self-reproducing ribozyme revealed by deep sequencing and kinetic modelling.

Cyrille Jeancolas, Yoshiya J Matsubara, Mykhailo Vybornyi, Camille N Lambert, Alex Blokhuis, Thomas Alline, Andrew D Griffiths, Sandeep Ameta, Sandeep Krishna, Philippe Nghe

Open access · hybridAbstract read
In one paragraph

Article in Chemical communications (Cambridge, England), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Primitive Oligomeric RNAs at the Origins of Life on Earth.International journal of molecular sciences · 2023
    Article
  5. Article
  6. Article
  7. Review
  8. Genome Evolution from Random Ligation of RNAs of Autocatalytic Sets.International journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 3 countries.

Cyrille JeancolasLaboratoire de Biochimie, UMR CNRS-ESPCI 8231, Chimie Biologie Innovation, PSL University, ESPCI Paris, 10 rue Vauquelin, Paris 75005, France. philippe.nghe@espci.psl.eu and Laboratoire d'Anthropologie Sociale, Collège de France, 52 rue du Cardinal Lemoine, Paris 75005, France.ORCID http://orcid.org/0000-0002-1443-7727
Yoshiya J MatsubaraSimons Centre for the Study of Living Machines, National Centre for Biological Sciences, Bellary Road, Bangalore 560 065, Karnataka, India.
Mykhailo VybornyiLaboratoire de Biochimie, UMR CNRS-ESPCI 8231, Chimie Biologie Innovation, PSL University, ESPCI Paris, 10 rue Vauquelin, Paris 75005, France. philippe.nghe@espci.psl.eu.
Camille N LambertLaboratoire de Biochimie, UMR CNRS-ESPCI 8231, Chimie Biologie Innovation, PSL University, ESPCI Paris, 10 rue Vauquelin, Paris 75005, France. philippe.nghe@espci.psl.eu.
Alex BlokhuisLaboratoire de Biochimie, UMR CNRS-ESPCI 8231, Chimie Biologie Innovation, PSL University, ESPCI Paris, 10 rue Vauquelin, Paris 75005, France. philippe.nghe@espci.psl.eu and Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen 9747 AG, The Netherlands.ORCID http://orcid.org/0000-0002-4594-596X
Thomas AllineLaboratoire de Biochimie, UMR CNRS-ESPCI 8231, Chimie Biologie Innovation, PSL University, ESPCI Paris, 10 rue Vauquelin, Paris 75005, France. philippe.nghe@espci.psl.eu.
Andrew D GriffithsLaboratoire de Biochimie, UMR CNRS-ESPCI 8231, Chimie Biologie Innovation, PSL University, ESPCI Paris, 10 rue Vauquelin, Paris 75005, France. philippe.nghe@espci.psl.eu.
Sandeep AmetaSimons Centre for the Study of Living Machines, National Centre for Biological Sciences, Bellary Road, Bangalore 560 065, Karnataka, India.ORCID http://orcid.org/0000-0003-2612-6018
Sandeep KrishnaSimons Centre for the Study of Living Machines, National Centre for Biological Sciences, Bellary Road, Bangalore 560 065, Karnataka, India.
Philippe NgheLaboratoire de Biochimie, UMR CNRS-ESPCI 8231, Chimie Biologie Innovation, PSL University, ESPCI Paris, 10 rue Vauquelin, Paris 75005, France. philippe.nghe@espci.psl.eu.
Centre National de la Recherche Scientifique · FRNational Centre for Biological Sciences · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We demonstrate that a recombinase ribozyme achieves multiple functions in the same reaction network: self-reproduction, iterative elongation and circularization of other RNAs, leading to synthesis of diverse products predicted by a kinetic model. This shows that key mechanisms can be integrated and controlled toward Darwinian evolution in RNA reaction networks.

Indexed as

AzoarcusBiocatalysisGenetic PhenomenaHigh-Throughput Nucleotide SequencingInverted Repeat SequencesKineticsRecombinasesRNARNA, BacterialRNA, CatalyticRecombinasesRNARNA, BacterialRNA, Catalytic

Identifiers

PMID34235521
PMCPMC8320737
OpenAlexW3178750709

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.