Evidence map›Paper›PMID 34234223›Full record

ArticleScientific reports2021

Molecular surveillance of shiga toxigenic Escherichia coli in selected beef abattoirs in Osun State Nigeria.

Femi Ayoade, Judith Oguzie, Philomena Eromon, Omolola E Omotosho, Tosin Ogunbiyi, Testimony Olumade, Kazeem Akano, Onikepe Folarin, Christian Happi

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Antimicrobial Resistance in DiverseAntibiotics (Basel, Switzerland) · 2024
    Review
  2. Whole genome sequencing analysis of non-O157 Shiga toxin-producingIranian journal of veterinary research · 2024
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Femi AyoadeDepartment of Biological Sciences, College of Natural Sciences, Redeemer's University, PMB 230, Ede, Osun State, Nigeria. ayoadef@run.edu.ng.
Judith OguzieDepartment of Biological Sciences, College of Natural Sciences, Redeemer's University, PMB 230, Ede, Osun State, Nigeria.
Philomena EromonAfrican Center of Excellence for the Genomics of Infectious Diseases (ACEGID), Redeemer's University, PMB 230, Ede, Osun State, Nigeria.
Omolola E OmotoshoBiochemistry Unit, Department of Biological Sciences, Covenant University, Ota, Nigeria.
Tosin OgunbiyiDepartment of Biological Sciences, Mountain Top University, KM 12, Lagos-Ibadan Expressway, Prayer City, Ogun State, Nigeria.
Testimony OlumadeDepartment of Biological Sciences, College of Natural Sciences, Redeemer's University, PMB 230, Ede, Osun State, Nigeria.
Kazeem AkanoDepartment of Biological Sciences, College of Natural Sciences, Redeemer's University, PMB 230, Ede, Osun State, Nigeria.
Onikepe FolarinDepartment of Biological Sciences, College of Natural Sciences, Redeemer's University, PMB 230, Ede, Osun State, Nigeria.
Christian HappiDepartment of Biological Sciences, College of Natural Sciences, Redeemer's University, PMB 230, Ede, Osun State, Nigeria.
Redeemer's University · NGCovenant University · NGMountain Top University · NG

Funding

Utilize Microbial Metagenomics for Viral Pathogen CharacterizationU54HG007480 · NHGRI · REDEEMER'S UNIVERSITY · PI HAPPI, CHRISTIAN T. · 2017 to 2022
$5.5M
Host and Microbial Genetic Determinants of Febrile Illness in West AfricaU01HG007480 · NHGRI · REDEEMER'S UNIVERSITY · PI HAPPI, CHRISTIAN T. · 2013 to 2016
$1.6M
NHGRI NIH HHS U01 HG007480NHGRI NIH HHS U54 HG007480NIH HHS SU01HG007480-03
6 · The paper itself

Abstract

Shiga toxigenic strains of E. coli (STEC) known to be etiological agents for diarrhea were screened for their incidence/occurrence in selected abattoirs sources in Osogbo metropolis of Osun State, Nigeria using a randomized block design. Samples were plated directly on selective and differential media and E. coli isolates. Multiplex PCR analysis was used to screen for the presence of specific virulence factors. These were confirmed serologically as non-O157 STEC using latex agglutination serotyping kit. Sequence analysis of PCR products was performed on a representative isolate showing the highest combination of virulence genes using the 16S gene for identification purposes only. Results showed that the average cfu/cm

Indexed as

AbattoirsFood ContaminationFood MicrobiologyEnvironmental MicrobiologyEscherichia coli InfectionsGenome, BacterialHigh-Throughput Nucleotide SequencingHumansMeatNigeriaPublic Health SurveillanceShiga-Toxigenic Escherichia coli

Identifiers

PMID34234223
PMCPMC8263744
OpenAlexW3180901278

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.