Evidence map›Paper›PMID 34234144›Full record

ArticleNature communications2021

Chaperone-like protein DAY plays critical roles in photomorphogenesis.

Ho-Seok Lee, Ilyeong Choi, Young Jeon, Hee-Kyung Ahn, Huikyong Cho, JiWoo Kim, Jae-Hee Kim, Jung-Min Lee, SungHee Lee, Julian Bünting and 8 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Regulation of chloroplast biogenesis, development, and signaling by endogenous and exogenous cues.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
  4. Genome-wide identification of DnaJ gene family inFrontiers in plant science · 2023
    Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 7 institutions in 4 countries.

Ho-Seok LeeGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Vienna, Austria.
Ilyeong ChoiDepartment of Systems biology, Yonsei University, Seoul, South Korea.
Young JeonDepartment of Systems biology, Yonsei University, Seoul, South Korea.
Hee-Kyung AhnThe Sainsbury Laboratory, University of East Anglia, Norwich, UK.ORCID 0000-0002-8884-0156
Huikyong ChoBPMP, University of Montpellier, CNRS, INRAE, Montpellier SupAgro, Montpellier, France.
JiWoo KimGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Vienna, Austria.
Jae-Hee KimGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Vienna, Austria.
Jung-Min LeeGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Vienna, Austria.
SungHee LeeGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Vienna, Austria.
Julian BüntingGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Vienna, Austria.
Dong Hye SeoDepartment of Systems biology, Yonsei University, Seoul, South Korea.
Tak LeeSainsbury Laboratory, University of Cambridge, Cambridge, UK.ORCID 0000-0001-7008-7605
Du-Hwa LeeGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Vienna, Austria.ORCID 0000-0003-4106-7730
Insuk LeeDepartment of Biotechnology, College of Life Sciences and Biotechnology, Yonsei University, Seoul, South Korea.ORCID 0000-0003-3146-6180
Man-Ho OhPlant Developmental Genetics, Department of Biological Science, College of Biological Sciences and Biotechnology, Chungnam National University, Daejeon, South Korea.
Tae-Wuk KimDepartment of Life Science, Hanyang University, Seoul, South Korea.
Youssef BelkhadirGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna BioCenter (VBC), Vienna, Austria. youssef.belkhadir@gmi.oeaw.ac.at.ORCID 0000-0001-7149-7139
Hyun-Sook PaiDepartment of Systems biology, Yonsei University, Seoul, South Korea. hspai@yonsei.ac.kr.ORCID 0000-0003-1345-5840
Gregor Mendel Institute of Molecular Plant Biology · ATYonsei University · KRCentre National de la Recherche Scientifique · FRChungnam National University · KRHanyang University · KRUniversity of Cambridge · GBUniversity of East Anglia · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Photomorphogenesis, light-mediated development, is an essential feature of all terrestrial plants. While chloroplast development and brassinosteroid (BR) signaling are known players in photomorphogenesis, proteins that regulate both pathways have yet to be identified. Here we report that DE-ETIOLATION IN THE DARK AND YELLOWING IN THE LIGHT (DAY), a membrane protein containing DnaJ-like domain, plays a dual-role in photomorphogenesis by stabilizing the BR receptor, BRI1, as well as a key enzyme in chlorophyll biosynthesis, POR. DAY localizes to both the endomembrane and chloroplasts via its first transmembrane domain and chloroplast transit peptide, respectively, and interacts with BRI1 and POR in their respective subcellular compartments. Using genetic analysis, we show that DAY acts independently on BR signaling and chlorophyll biogenesis. Collectively, this work uncovers DAY as a factor that simultaneously regulates BR signaling and chloroplast development, revealing a key regulator of photomorphogenesis that acts across cell compartments.

Indexed as

ArabidopsisArabidopsis ProteinsBrassinosteroidsChlorophyllChloroplastsEtiolationGene Expression Regulation, PlantGene Knockdown TechniquesHSP40 Heat-Shock ProteinsLightMembrane ProteinsMicrotubule-Associated ProteinsMorphogenesisMutationPlants, Genetically ModifiedProtein KinasesArabidopsis ProteinsAT3G51140 protein, ArabidopsisBrassinosteroidsBRI1 protein, ArabidopsisChlorophyllHSP40 Heat-Shock ProteinsMembrane ProteinsMicrotubule-Associated ProteinsPOR protein, ArabidopsisProtein KinasesRecombinant Proteins

Identifiers

PMID34234144
PMCPMC8263706
OpenAlexW3181920438

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.