Evidence map›Paper›PMID 34234044›Full record

ArticleMicrobes and environments2021

Nitrogen Deficiency-induced Bacterial Community Shifts in Soybean Roots.

Wataru Yazaki, Tomohisa Shimasaki, Yuichi Aoki, Sachiko Masuda, Arisa Shibata, Wataru Suda, Ken Shirasu, Kazufumi Yazaki, Akifumi Sugiyama

Open access · diamondAbstract read
In one paragraph

Article in Microbes and environments, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Wataru YazakiResearch Institute for Sustainable Humanosphere, Kyoto University.
Tomohisa ShimasakiResearch Institute for Sustainable Humanosphere, Kyoto University.
Yuichi AokiTohoku Medical Megabank Organization, Tohoku University.
Sachiko MasudaPlant Immunity Research Group, RIKEN Center for Sustainable Resource Science.
Arisa ShibataPlant Immunity Research Group, RIKEN Center for Sustainable Resource Science.
Wataru SudaLaboratory for Microbiome Sciences, RIKEN Center for Integrative Medical Sciences.
Ken ShirasuPlant Immunity Research Group, RIKEN Center for Sustainable Resource Science.
Kazufumi YazakiResearch Institute for Sustainable Humanosphere, Kyoto University.
Akifumi SugiyamaResearch Institute for Sustainable Humanosphere, Kyoto University.
RIKEN Center for Sustainable Resource Science · JPKyoto University · JPUnited Nations University Institute for Sustainability and Peace · JPRIKEN Center for Integrative Medical Sciences · JPTohoku Medical Megabank Organization · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nitrogen deficiency affects soybean growth and physiology, such as symbiosis with rhizobia; however, its effects on the bacterial composition of the soybean root microbiota remain unclear. A bacterial community analysis by 16S rRNA gene amplicon sequencing showed nitrogen deficiency-induced bacterial community shifts in soybean roots with the marked enrichment of Methylobacteriaceae. The abundance of Methylobacteriaceae was low in the roots of field-grown soybean without symptoms of nitrogen deficiency. Although Methylobacteriaceae isolated from soybean roots under nitrogen deficiency did not promote growth or nodulation when inoculated into soybean roots, these results indicate that the enrichment of Methylobacteriaceae in soybean roots is triggered by nitrogen-deficiency stress.

Indexed as

MicrobiotaBacteriaDNA, BacterialGlycine maxNitrogenPlant RootsRNA, Ribosomal, 16SSoilSoil MicrobiologyDNA, BacterialNitrogenRNA, Ribosomal, 16SSoilMethylobacteriaceaenitrogen deficiencyroot microbiotasoybean (Glycine max)

Identifiers

PMID34234044
PMCPMC8446753
OpenAlexW3182794028

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.