Evidence map›Paper›PMID 34233174›Full record

ArticleCell chemical biology2022

The Plasmodium falciparum ABC transporter ABCI3 confers parasite strain-dependent pleiotropic antimalarial drug resistance.

James M Murithi, Ioanna Deni, Charisse Flerida A Pasaje, John Okombo, Jessica L Bridgford, Nina F Gnädig, Rachel L Edwards, Tomas Yeo, Sachel Mok, Anna Y Burkhard and 23 more

Open access · hybridAbstract read
In one paragraph

Article in Cell chemical biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
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  11. Article
  12. Article
  13. PMRT1, amBio · 2022
    Article
  14. Updated List of Transport Proteins inFrontiers in cellular and infection microbiology · 2022
    Review
  15. Frontiers in pharmacology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors at 11 institutions in 4 countries.

James M MurithiDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Ioanna DeniDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Charisse Flerida A PasajeDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
John OkomboDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Jessica L BridgfordDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Nina F GnädigDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Rachel L EdwardsDivision of Infectious Diseases, Allergy and Immunology, Center for Vaccine Development, St. Louis University, St. Louis, MO 63104, USA.
Tomas YeoDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Sachel MokDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Anna Y BurkhardDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Olivia Coburn-FlynnDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Eva S IstvanDepartment of Medicine, Division of Infectious Diseases, and Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Tomoyo Sakata-KatoDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA; Infectious Disease and Microbiome Program, Broad Institute, Cambridge, MA 02142, USA.
Maria G Gomez-LorenzoGlobal Health Pharma Research Unit, GlaxoSmithKline, 28760 Tres Cantos, Madrid, Spain.
Annie N CowellSchool of Medicine, University of California San Diego (UCSD), La Jolla, CA 92093, USA.
Kathryn J WichtDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA; Drug Discovery and Development Center (H3D) and South African Medical Research Council Drug Discovery and Development Research Unit, Department of Chemistry and Institute of Infectious Diseases and Molecular Medicine, University of Cape Town, Rondebosch 7701, South Africa.
Claire Le ManachDrug Discovery and Development Center (H3D) and South African Medical Research Council Drug Discovery and Development Research Unit, Department of Chemistry and Institute of Infectious Diseases and Molecular Medicine, University of Cape Town, Rondebosch 7701, South Africa.
Gavreel F KalantarovDivision of Experimental Therapeutics, Department of Medicine, Columbia University Irving Medical Center, New York, NY 10032, USA.
Sumanta DeyDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Maëlle DuffeyMedicines for Malaria Venture, 1215 Geneva, Switzerland.
Benoît LaleuMedicines for Malaria Venture, 1215 Geneva, Switzerland.
Amanda K LukensDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA; Infectious Disease and Microbiome Program, Broad Institute, Cambridge, MA 02142, USA.
Sabine OttilieSchool of Medicine, University of California San Diego (UCSD), La Jolla, CA 92093, USA.
Manu VanaerschotDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Ilya N TrakhtDivision of Experimental Therapeutics, Department of Medicine, Columbia University Irving Medical Center, New York, NY 10032, USA.
Francisco-Javier GamoGlobal Health Pharma Research Unit, GlaxoSmithKline, 28760 Tres Cantos, Madrid, Spain.
Dyann F WirthDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA; Infectious Disease and Microbiome Program, Broad Institute, Cambridge, MA 02142, USA.
Daniel E GoldbergDepartment of Medicine, Division of Infectious Diseases, and Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Audrey R Odom JohnChildren's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Kelly ChibaleDrug Discovery and Development Center (H3D) and South African Medical Research Council Drug Discovery and Development Research Unit, Department of Chemistry and Institute of Infectious Diseases and Molecular Medicine, University of Cape Town, Rondebosch 7701, South Africa.
Elizabeth A WinzelerSchool of Medicine, University of California San Diego (UCSD), La Jolla, CA 92093, USA.
Jacquin C NilesDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
David A FidockDepartment of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA; Division of Infectious Diseases, Department of Medicine, Columbia University Irving Medical Center, New York, NY 10032, USA. Electronic address: df2260@cumc.columbia.edu.
Columbia University Irving Medical Center · USMassachusetts Institute of Technology · USSouth African Medical Research Council · ZAUniversity of California, San Diego · USGlaxoSmithKline (Spain) · ESHarvard University · USMedicines for Malaria Venture · CHWashington University in St. Louis · USBroad Institute · USChildren's Hospital of Philadelphia · USSaint Louis University · US

Funding

Role of pfcrt in chloroquine resistance in P. falciparumR01AI050234 · NIAID · YESHIVA UNIVERSITY · PI FIDOCK, DAVID A · 2001 to 2015
$5.7M
MEP pathway resistance in Plasmodium falciparumR01AI103280 · NIAID · WASHINGTON UNIVERSITY · PI Audrey Ragan Odom John · 2013 to 2026
$5.5M
Leveraging PfCRT Structure to Discern Function and Predict Emergence of Drug-Resistant MalariaR01AI147628 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI David A Fidock, Filippo Mancia · 2019 to 2026
$5.1M
Elucidating the molecular basis of piperaquine resistance in Plasmodium falciparumR01AI124678 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI David A Fidock · 2016 to 2026
$4.3M
Discovery of long-acting, chemoprotective antimalarial compoundsR01AI152533 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI WINZELER, ELIZABETH A · 2020 to 2024
$3.5M
TARGETING ISPC TO TREAT MALARIAR21AI123808 · NIAID · WASHINGTON UNIVERSITY · PI ODOM JOHN, AUDREY RAGAN · 2016 to 2017
$440k
NIAID NIH HHS R01 AI050234NIAID NIH HHS R01 AI103280NIAID NIH HHS R01 AI124678NIAID NIH HHS R01 AI147628NIAID NIH HHS R01 AI152533NIAID NIH HHS R21 AI123808
6 · The paper itself

Abstract

Widespread Plasmodium falciparum resistance to first-line antimalarials underscores the vital need to develop compounds with novel modes of action and identify new druggable targets. Here, we profile five compounds that potently inhibit P. falciparum asexual blood stages. Resistance selection studies with three carboxamide-containing compounds, confirmed by gene editing and conditional knockdowns, identify point mutations in the parasite transporter ABCI3 as the primary mediator of resistance. Selection studies with imidazopyridine or quinoline-carboxamide compounds also yield changes in ABCI3, this time through gene amplification. Imidazopyridine mode of action is attributed to inhibition of heme detoxification, as evidenced by cellular accumulation and heme fractionation assays. For the copy-number variation-selecting imidazopyridine and quinoline-carboxamide compounds, we find that resistance, manifesting as a biphasic concentration-response curve, can independently be mediated by mutations in the chloroquine resistance transporter PfCRT. These studies reveal the interconnectedness of P. falciparum transporters in overcoming drug pressure in different parasite strains.

Indexed as

AntimalarialsFolic Acid AntagonistsMalaria, FalciparumParasitesQuinolinesAnimalsATP-Binding Cassette TransportersHemeMembrane Transport ProteinsPlasmodium falciparumProtozoan ProteinsAntimalarialsATP-Binding Cassette TransportersFolic Acid AntagonistsHemeMembrane Transport ProteinsProtozoan ProteinsQuinolinesABCI3biphasic dose-response curvescellular accumulation assaysconditional knockdownscopy-number variationsCRISPR/Cas9heme fractionationpfcrtPlasmodium falciparum malaria

Identifiers

PMID34233174
PMCPMC8727639
OpenAlexW3181213772

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.