Evidence map›Paper›PMID 34231081›Full record

ArticleGenetica2021

Chloroplastic and nuclear diversity of endemic Prunus armeniaca L. species in the oasis agroecosystems.

Hedia Bourguiba, Mohamed-Amine Batnini, Chahnez Naccache, Nadia Zitouna, Neila Trifi-Farah, Jean-Marc Audergon, Lamia Krichen

Abstract read
PubMed Publisher
In one paragraph

Article in Genetica, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Hedia BourguibaUniversité Tunis El Manar (UTM) - Faculté Des Sciences De Tunis (FST), Laboratoire de Génétique Moléculaire, Immunologie et Biotechnologie (LGMIB) (LR99ES12), Campus universitaire Farhat Hached, Tunis, Tunisia. hediabourguiba@hotmail.com.ORCID http://orcid.org/0000-0003-1260-9545
Mohamed-Amine BatniniDepartment of Plant Pathology, OARDC/OSU, 120 Selby, 1680 Madison Ave, Wooster, OH, 44691, USA.
Chahnez NaccacheUniversité Tunis El Manar (UTM) - Faculté Des Sciences De Tunis (FST), Laboratoire de Biochimie et Biotechnology (LR01ES05), Tunis, Tunisia.
Nadia ZitounaLR16IPT05, Laboratoire de Génomique Biomédicale et Oncogénétique, Institut Pasteur de Tunis, Université de Tunis El Manar, Tunis, Tunisia.
Neila Trifi-FarahUniversité Tunis El Manar (UTM) - Faculté Des Sciences De Tunis (FST), Laboratoire de Génétique Moléculaire, Immunologie et Biotechnologie (LGMIB) (LR99ES12), Campus universitaire Farhat Hached, Tunis, Tunisia.
Jean-Marc AudergonINRAe Centre PACA, UR 1052 GAFL, Domaine St Maurice, 67, allée des chênes, CS60094, 84143, Montfavet Cedex, France.
Lamia KrichenUniversité Tunis El Manar (UTM) - Faculté Des Sciences De Tunis (FST), Laboratoire de Génétique Moléculaire, Immunologie et Biotechnologie (LGMIB) (LR99ES12), Campus universitaire Farhat Hached, Tunis, Tunisia.
Tunis University · TNInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FRNew Leaf Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tunisia is characterized by the presence of specific seed-propagated apricot (Prunus armeniaca L.) material which is found in the oasis agroecosystems. In order to highlight the genetic diversity, population structure, and demographic history of this germplasm, 33 apricot accessions collected from six different oasis regions in southwestern Tunisia were genotyped using 24 microsatellite markers. A total number of 111 alleles was detected with an average of 4.62 alleles per locus. Bayesian model-based clustering analysis indicated four subdivisions within the collection sampled that corresponded mainly to the geographic origin of the material. The analysis of the 33 accessions using chloroplast markers allowed the identification of 32 haplotypes. Overall, the present study highlighted the high Tunisian apricot's diversity in the traditional oasis agroecosystems with low genetic differentiation. Understanding the structure of seed-propagated apricot collection is crucial for managing collections in regard to adaptive traits for Arid and Saharan climates as well as for identifying interesting genotypes that can be integrated into international coordinated actions of breeding programs.

Indexed as

Genome, ChloroplastPolymorphism, GeneticEcosystemEndangered SpeciesHaplotypesMicrosatellite RepeatsPrunus armeniacaSeedsApricotBottleneckChloroplast markersClimate adaptationMicrosatellitesSeed-propagation

Identifiers

PMID34231081
OpenAlexW3179022236

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.