Evidence map›Paper›PMID 34230473›Full record

ArticleNature communications2021

Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods.

Juan José Pierella Karlusich, Eric Pelletier, Fabien Lombard, Madeline Carsique, Etienne Dvorak, Sébastien Colin, Marc Picheral, Francisco M Cornejo-Castillo, Silvia G Acinas, Rainer Pepperkok and 5 more

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Nitrogen Fixation Associated withEnvironmental science & technology · 2026
    Article
  6. The interplay between the marine diazotrophApplied and environmental microbiology · 2026
    Article
  7. Review
  8. Nitrogen-fixing microbes gain genes in diverse types of living environments.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Oxygen-tolerant nitrogen fixation in a marine alga-colonizingApplied and environmental microbiology · 2025
    Article
  10. Awaited paradigm shift in marine NNational science review · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Particle-associated NScience advances · 2025
    Article
  17. Article
  18. Aggregation and remineralization ofISME communications · 2025
    Article
  19. ISME communications · 2025
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Juan José Pierella KarlusichInstitut de Biologie de l'ENS (IBENS), Département de biologie, École normale supérieure, CNRS, INSERM, Université PSL, Paris, France.
Eric PelletierCNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.
Fabien LombardCNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.ORCID 0000-0002-8626-8782
Madeline CarsiqueInstitut de Biologie de l'ENS (IBENS), Département de biologie, École normale supérieure, CNRS, INSERM, Université PSL, Paris, France.
Etienne DvorakInstitut de Biologie de l'ENS (IBENS), Département de biologie, École normale supérieure, CNRS, INSERM, Université PSL, Paris, France.ORCID 0000-0002-7347-4544
Sébastien ColinEuropean Molecular Biology Laboratory, Heidelberg, Germany.
Marc PicheralCNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.
Francisco M Cornejo-CastilloSorbonne Université, CNRS, Station Biologique de Roscoff, UMR 7144, ECOMAP, Roscoff, France.ORCID 0000-0001-8431-9278
Silvia G AcinasDepartment of Marine Biology and Oceanography, Institut de Ciènces del Mar, CSIC, Barcelona, Spain.ORCID 0000-0002-3439-0428
Rainer PepperkokCNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.
Eric KarsentiInstitut de Biologie de l'ENS (IBENS), Département de biologie, École normale supérieure, CNRS, INSERM, Université PSL, Paris, France.
Colomban de VargasCNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.
Patrick WinckerCNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.ORCID 0000-0001-7562-3454
Chris BowlerInstitut de Biologie de l'ENS (IBENS), Département de biologie, École normale supérieure, CNRS, INSERM, Université PSL, Paris, France. cbowler@bio.ens.psl.eu.
Rachel A FosterDepartment of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden. rachel.foster@su.se.ORCID 0000-0002-8696-1835

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nitrogen fixation has a critical role in marine primary production, yet our understanding of marine nitrogen-fixers (diazotrophs) is hindered by limited observations. Here, we report a quantitative image analysis pipeline combined with mapping of molecular markers for mining >2,000,000 images and >1300 metagenomes from surface, deep chlorophyll maximum and mesopelagic seawater samples across 6 size fractions (<0.2-2000 μm). We use this approach to characterise the diversity, abundance, biovolume and distribution of symbiotic, colony-forming and particle-associated diazotrophs at a global scale. We show that imaging and PCR-free molecular data are congruent. Sequence reads indicate diazotrophs are detected from the ultrasmall bacterioplankton (<0.2 μm) to mesoplankton (180-2000 μm) communities, while images predict numerous symbiotic and colony-forming diazotrophs (>20 µm). Using imaging and molecular data, we estimate that polyploidy can substantially affect gene abundances of symbiotic versus colony-forming diazotrophs. Our results support the canonical view that larger diazotrophs (>10 μm) dominate the tropical belts, while unicellular cyanobacterial and non-cyanobacterial diazotrophs are globally distributed in surface and mesopelagic layers. We describe co-occurring diazotrophic lineages of different lifestyles and identify high-density regions of diazotrophs in the global ocean. Overall, we provide an update of marine diazotroph biogeographical diversity and present a new bioimaging-bioinformatic workflow.

Indexed as

Aquatic OrganismsBacteriaCyanobacteriaMolecular ImprintingNitrogenNitrogen FixationOceans and SeasPhylogenyPlanktonSeawaterSymbiosisNitrogen

Identifiers

PMID34230473
PMCPMC8260585

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.