Evidence map›Paper›PMID 34230471›Full record

ArticleNature communications2021

Neofunctionalisation of the Sli gene leads to self-compatibility and facilitates precision breeding in potato.

Ernst-Jan Eggers, Ate van der Burgt, Sjaak A W van Heusden, Michiel E de Vries, Richard G F Visser, Christian W B Bachem, Pim Lindhout

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
14.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 85 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. CRISPR-Cas Gene Editing Technology in Potato.International journal of molecular sciences · 2025
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. The Quest for thePotato research · 2025
    Article
  17. Jan and mini-Jan, a model system for potato functional genomics.bioRxiv : the preprint server for biology · 2024
    Article
  18. Diploid inbred-based hybrids: fast-forward breeding approach in potatoes.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ernst-Jan EggersSolynta, Dreijenlaan, Wageningen, The Netherlands.
Ate van der BurgtSolynta, Dreijenlaan, Wageningen, The Netherlands.
Sjaak A W van HeusdenPlant Breeding, Wageningen University & Research, Wageningen, The Netherlands.
Michiel E de VriesSolynta, Dreijenlaan, Wageningen, The Netherlands.ORCID 0000-0002-1453-7672
Richard G F VisserPlant Breeding, Wageningen University & Research, Wageningen, The Netherlands.ORCID 0000-0002-0213-4016
Christian W B BachemPlant Breeding, Wageningen University & Research, Wageningen, The Netherlands. christian.bachem@wur.nl.ORCID 0000-0002-3077-6833
Pim LindhoutSolynta, Dreijenlaan, Wageningen, The Netherlands.
Wageningen University & Research · NLGraduate School Experimental Plant Sciences · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic gain in potato is hampered by the heterozygous tetraploid genome of cultivated potato. Converting potato into a diploid inbred-line based F1-hybrid crop provides a promising route towards increased genetic gain. The introduction of a dominant S-locus inhibitor (Sli) gene into diploid potato germplasm allows efficient generation of self-fertilized seeds and thus the development of potato inbred lines. Little is known about the structure and function of the Sli locus. Here we describe the mapping of Sli to a 12.6 kb interval on chromosome 12 using a recombinant screen approach. One of two candidate genes present in this interval shows a unique sequence that is exclusively present in self-compatible lines. We describe an expression vector that converts self-incompatible genotypes into self-compatible and a CRISPR-Cas9 vector that converts SC genotypes into SI. The Sli gene encodes an F-box protein that is specifically expressed in pollen from self-compatible plants. A 533 bp insertion in the promotor of that gene leads to a gain of function mutation, which overcomes self-pollen rejection.

Indexed as

Plant BreedingChromosome MappingChromosomes, PlantCRISPR-Cas SystemsDiploidyGenes, PlantGenotypeHeterozygoteMagnoliopsidaPlant ProteinsPollenSeedsSelf-Incompatibility in Flowering PlantsSolanum tuberosumPlant Proteins

Identifiers

PMID34230471
PMCPMC8260583
OpenAlexW3178191493

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.