Evidence map›Paper›PMID 34228741›Full record

ArticlePloS one2021

Production and сharacterization of the exopolysaccharide from strain Paenibacillus polymyxa 2020.

Elena V Liyaskina, Nadezhda A Rakova, Alevtina A Kitykina, Valentina V Rusyaeva, Philip V Toukach, Alexey Fomenkov, Saulius Vainauskas, Richard J Roberts, Victor V Revin

Abstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Production of Bacterial Exopolysaccharides: Xanthan and Bacterial Cellulose.International journal of molecular sciences · 2023
    Review
  8. Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Elena V LiyaskinaDepartment of Biotechnology, Bioengineering and Biochemistry of the National Research Mordovia State University, Saransk, Russia.
Nadezhda A RakovaDepartment of Biotechnology, Bioengineering and Biochemistry of the National Research Mordovia State University, Saransk, Russia.
Alevtina A KitykinaDepartment of Biotechnology, Bioengineering and Biochemistry of the National Research Mordovia State University, Saransk, Russia.
Valentina V RusyaevaDepartment of Biotechnology, Bioengineering and Biochemistry of the National Research Mordovia State University, Saransk, Russia.
Philip V ToukachN.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0001-9887-8919
Alexey FomenkovNew England Biolabs Inc., Ipswich, MA, United States of America.ORCID 0000-0002-2463-5946
Saulius VainauskasNew England Biolabs Inc., Ipswich, MA, United States of America.
Richard J RobertsNew England Biolabs Inc., Ipswich, MA, United States of America.ORCID 0000-0002-4348-0169
Victor V RevinDepartment of Biotechnology, Bioengineering and Biochemistry of the National Research Mordovia State University, Saransk, Russia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Paenibacillus spp. exopolysaccharides (EPSs) have become a growing interest recently as a source of biomaterials. In this study, we characterized Paenibacillus polymyxa 2020 strain, which produces a large quantity of EPS (up to 68 g/L),and was isolated from wasp honeycombs. Here we report its complete genome sequence and full methylome analysis detected by Pacific Biosciences SMRT sequencing. Moreover, bioinformatic analysis identified a putative levan synthetic operon. SacC and sacB genes have been cloned and their products identified as glycoside hydrolase and levansucrase respectively. The Fourier transform infrared (FT-IR) and nuclear magnetic resonance (NMR) spectra demonstrated that the EPS is a linear β-(2→6)-linked fructan (levan). The structure and properties of levan polymer produced from sucrose and molasses were analyzed by FT-IR, NMR, scanning electron microscopy (SEM), high performance size exclusion chromatography (HPSEC), thermogravimetric analysis (TGA), cytotoxicity tests and showed low toxicity and high biocompatibility. Thus, P. polymyxa 2020 could be an exceptional cost-effective source for the industrial production of levan-type EPSs and to obtain functional biomaterials based on it for a broad range of applications, including bioengineering.

Indexed as

Cloning, MolecularEpigenomeMagnetic Resonance SpectroscopyMicroscopy, Electron, ScanningPaenibacillus polymyxaPolysaccharides, BacterialSequence Analysis, DNASpectrometry, X-Ray EmissionSpectroscopy, Fourier Transform InfraredPolysaccharides, Bacterial

Identifiers

PMID34228741
PMCPMC8259973

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.