Evidence map›Paper›PMID 34228645›Full record

ArticleThe Journal of clinical investigation2021

HLA-E-restricted HIV-1-specific CD8+ T cell responses in natural infection.

Anju Bansal, Mika N Gehre, Kai Qin, Sarah Sterrett, Ayub Ali, Ying Dang, Sojan Abraham, Margaret C Costanzo, Leon A Venegas, Jianming Tang and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

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  17. Instability of the HLA-E peptidome of HIV presents a major barrier to therapeutic targeting.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Anju BansalDepartment of Medicine, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama, USA.
Mika N GehreDepartment of Biological Sciences, University of Texas at El Paso, El Paso, Texas, USA.
Kai QinDepartment of Medicine, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama, USA.
Sarah SterrettDepartment of Medicine, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama, USA.
Ayub AliDepartment of Medicine and AIDS Institute, UCLA, Los Angeles, California, USA.
Ying DangDepartment of Biomedical Sciences, Texas Tech University Health Sciences Center, Paul L. Foster School of Medicine, El Paso, Texas, USA.
Sojan AbrahamDepartment of Biomedical Sciences, Texas Tech University Health Sciences Center, Paul L. Foster School of Medicine, El Paso, Texas, USA.
Margaret C CostanzoDepartment of Biological Sciences, University of Texas at El Paso, El Paso, Texas, USA.
Leon A VenegasDepartment of Biological Sciences, University of Texas at El Paso, El Paso, Texas, USA.
Jianming TangDepartment of Medicine, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama, USA.
N ManjunathDepartment of Biomedical Sciences, Texas Tech University Health Sciences Center, Paul L. Foster School of Medicine, El Paso, Texas, USA.
Mark A BrockmanSimon Fraser University, Burnaby, British Columbia, Canada.
Otto O YangDepartment of Medicine and AIDS Institute, UCLA, Los Angeles, California, USA.
June Kan-MitchellDepartment of Biological Sciences, University of Texas at El Paso, El Paso, Texas, USA.
Paul A GoepfertDepartment of Medicine, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama, USA.
University of Alabama at Birmingham · USThe University of Texas at El Paso · USTexas Tech University · USBlack AIDS Institute · USSimon Fraser University · CA

Funding

Defining the biological relevance of HIV specific HLA-E restricted CD8 T cell responsesR01AI162168 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BANSAL, ANJU, GOEPFERT, PAUL A. · 2021 to 2024
$3.0M
Effector and Regulatory Activities of HLA-E-restricted HIV-specific abCD8 T CellsR01AI102663 · NIAID · UNIVERSITY OF TEXAS EL PASO · PI KAN-MITCHELL, JUNE · 2012 to 2015
$2.0M
NIAID NIH HHS R01 AI102663NIAID NIH HHS R01 AI162168
6 · The paper itself

Abstract

CD8+ T cell responses restricted by MHC-E, a nonclassical MHC molecule, have been associated with protection in an SIV/rhesus macaque model. The biological relevance of HLA-E-restricted CD8+ T cell responses in HIV infection, however, remains unknown. In this study, CD8+ T cells responding to HIV-1 Gag peptides presented by HLA-E were analyzed. Using in vitro assays, we observed HLA-E-restricted T cell responses to what we believe to be a newly identified subdominant Gag-KL9 as well as a well-described immunodominant Gag-KF11 epitope in T cell lines derived from chronically HIV-infected patients and also primed from healthy donors. Blocking of the HLA-E/KF11 binding by the B7 signal peptide resulted in decreased CD8+ T cell responses. KF11 presented via HLA-E in HIV-infected cells was recognized by antigen-specific CD8+ T cells. Importantly, bulk CD8+ T cells obtained from HIV-infected individuals recognized infected cells via HLA-E presentation. Ex vivo analyses at the epitope level showed a higher responder frequency of HLA-E-restricted responses to KF11 compared with KL9. Taken together, our findings of HLA-E-restricted HIV-specific immune responses offer intriguing and possibly paradigm-shifting insights into factors that contribute to the immunodominance of CD8+ T cell responses in HIV infection.

Indexed as

Amino Acid SequenceAntigen PresentationCD8-Positive T-LymphocytesCell Linegag Gene Products, Human Immunodeficiency VirusHistocompatibility Antigens Class IHIV-1HIV InfectionsHIV SeronegativityHLA-B AntigensHLA-E AntigensHumansImmunodominant EpitopesIn Vitro TechniquesReceptors, Antigen, T-Cell, alpha-betagag Gene Products, Human Immunodeficiency VirusHistocompatibility Antigens Class IHLA-B57 antigenHLA-B AntigensHLA-E AntigensImmunodominant EpitopesReceptors, Antigen, T-Cell, alpha-betaInfectious diseaseT cells

Identifiers

PMID34228645
PMCPMC8363272
OpenAlexW3181088912

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.