Evidence map›Paper›PMID 34228045›Full record

ArticleThe Journal of general physiology2021

A novel Hv1 inhibitor reveals a new mechanism of inhibition of a voltage-sensing domain.

Chang Zhao, Liang Hong, Saleh Riahi, Victoria T Lim, Douglas J Tobias, Francesco Tombola

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Hv1 channel in immune cells and pharmacology.Pharmacological research · 2025
    Review
  2. Quantitative insights into the mechanism of proton conduction and selectivity for the human voltage-gated proton channel Hv1.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. Identification of a Novel Structural Class of HJournal of chemical information and modeling · 2024
    Article
  4. Trapping Charge Mechanism in Hv1 Channels (International journal of molecular sciences · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Chang ZhaoDepartment of Physiology and Biophysics, University of California, Irvine, Irvine, CA.ORCID 0000-0003-4138-6424
Liang HongDepartment of Physiology and Biophysics, University of California, Irvine, Irvine, CA.
Saleh RiahiDepartment of Chemistry, University of California, Irvine, Irvine, CA.
Victoria T LimDepartment of Chemistry, University of California, Irvine, Irvine, CA.
Douglas J TobiasChao Family Comprehensive Cancer Center, University of California, Irvine, Irvine, CA.
Francesco TombolaDepartment of Physiology and Biophysics, University of California, Irvine, Irvine, CA.ORCID 0000-0002-9315-0352
University of California, Irvine · US

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Melanie Funes · 1994 to 2026
$57.9M
Mechanisms of Permeation and Gating of Voltage-Sensing DomainsR01GM098973 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI TOMBOLA, FRANCESCO · 2011 to 2025
$4.5M
NCI NIH HHS P30 CA062203NCI NIH HHS P30CA062203NIGMS NIH HHS R01 GM098973NIGMS NIH HHS R01GM098973
6 · The paper itself

Abstract

Voltage-gated sodium, potassium, and calcium channels consist of four voltage-sensing domains (VSDs) that surround a central pore domain and transition from a down state to an up state in response to membrane depolarization. While many types of drugs bind pore domains, the number of organic molecules known to bind VSDs is limited. The Hv1 voltage-gated proton channel is made of two VSDs and does not contain a pore domain, providing a simplified model for studying how small ligands interact with VSDs. Here, we describe a ligand, named HIF, that interacts with the Hv1 VSD in the up and down states. We find that HIF rapidly inhibits proton conduction in the up state by blocking the open channel, as previously described for 2-guanidinobenzimidazole and its derivatives. HIF, however, interacts with a site slowly accessible in the down state. Functional studies and MD simulations suggest that this interaction traps the compound in a narrow pocket lined with charged residues within the VSD intracellular vestibule, which results in slow recovery from inhibition. Our findings point to a "wrench in gears" mechanism whereby side chains within the binding pocket trap the compound as the teeth of interlocking gears. We propose that the use of screening strategies designed to target binding sites with slow accessibility, similar to the one identified here, could lead to the discovery of new ligands capable of interacting with VSDs of other voltage-gated ion channels in the down state.

Indexed as

Ion Channel GatingIon ChannelsPotassiumProtonsIon ChannelsPotassiumProtons

Identifiers

PMID34228045
PMCPMC8263925
OpenAlexW3178658530

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.