Evidence map›Paper›PMID 34224107›Full record

ReviewTranslational stroke research2022

Epitranscriptomic Modifications Modulate Normal and Pathological Functions in CNS.

Anil K Chokkalla, Suresh L Mehta, Raghu Vemuganti

Abstract readReview
In one paragraph

Review in Translational stroke research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Epitranscriptomic alterations induced by environmental toxins: implications for RNA modifications and disease.Genes and environment : the official journal of the Japanese Environmental Mutagen Society · 2025
    Review
  4. Loss of Epitranscriptomic Modification NTranslational stroke research · 2025
    Article
  5. Review
  6. Review
  7. Review
  8. Dysregulation of the Epitranscriptomic Mark mTranslational stroke research · 2023
    Article
  9. Article
  10. Article
  11. Immunomodulatory role of glycoRNAs in the brain.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2023
    Review
  12. Article
  13. Article
  14. Review
  15. Chronic corticosterone disrupts the circadian rhythm of CRH expression and mJournal of animal science and biotechnology · 2022
    Article
  16. Noncoding RNA crosstalk in brain health and diseases.Neurochemistry international · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Anil K ChokkallaCellular and Molecular Pathology Graduate Program, University of Wisconsin, Madison, WI, USA.
Suresh L MehtaDepartment of Neurological Surgery, University of Wisconsin-Madison, 600 Highland Ave, Madison, WI, 53792, USA.
Raghu VemugantiCellular and Molecular Pathology Graduate Program, University of Wisconsin, Madison, WI, USA. vemuganti@neurosurgery.wisc.edu.ORCID 0000-0002-5714-270X

Funding

DNA hydroxymethylation and post stroke brain damageR01NS109459 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI VEMUGANTI, RAGHU · 2018 to 2022
$2.1M
BLRD Research Career Scientist Award ApplicationIK6BX005690 · VA · WM S. MIDDLETON MEMORIAL VETERANS HOSP · PI VEMUGANTI, RAGHU · 2021 to 2025
–
BLRD VA I01 BX004344BLRD VA IK6 BX005690NINDS NIH HHS R01 NS109459
6 · The paper itself

Abstract

RNA is more than just a combination of four genetically encoded nucleobases as it carries extra information in the form of epitranscriptomic modifications. Diverse chemical groups attach covalently to RNA to enhance the plasticity of cellular transcriptome. The reversible and dynamic nature of epitranscriptomic modifications allows RNAs to achieve rapid and context-specific gene regulation. Dedicated cellular machinery comprising of writers, erasers, and readers drives the epitranscriptomic signaling. Epitranscriptomic modifications control crucial steps of mRNA metabolism such as splicing, export, localization, stability, degradation, and translation. The majority of the epitranscriptomic modifications are highly abundant in the brain and contribute to activity-dependent gene expression. Thus, they regulate the vital physiological processes of the brain, such as synaptic plasticity, neurogenesis, and stress response. Furthermore, epitranscriptomic alterations influence the progression of several neurologic disorders. This review discussed the molecular mechanisms of epitranscriptomic regulation in neurodevelopmental and neuropathological conditions with the goal to identify novel therapeutic targets.

Indexed as

Epigenesis, GeneticRNAGene Expression RegulationNeuronal PlasticityTranscriptomeRNA5-MethylcytosineBrainInosineN1-MethyladenosineN6-MethyladenosinePseudouridineRNA modificationsStroke

Identifiers

PMID34224107
PMCPMC8727632

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.