Evidence map›Paper›PMID 34220925›Full record

ArticleFrontiers in genetics2021

Genotyping and Whole-Genome Resequencing of Welsh Sheep Breeds Reveal Candidate Genes and Variants for Adaptation to Local Environment and Socioeconomic Traits.

James Sweet-Jones, Vasileios Panagiotis Lenis, Andrey A Yurchenko, Nikolay S Yudin, Martin Swain, Denis M Larkin

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

James Sweet-JonesRoyal Veterinary College, University of London, London, United Kingdom.
Vasileios Panagiotis LenisInstitute of Biological, Environmental and Rural Sciences, University of Aberystwyth, Aberystwyth, United Kingdom.
Andrey A YurchenkoThe Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), Novosibirsk, Russia.
Nikolay S YudinThe Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), Novosibirsk, Russia.
Martin SwainInstitute of Biological, Environmental and Rural Sciences, University of Aberystwyth, Aberystwyth, United Kingdom.
Denis M LarkinRoyal Veterinary College, University of London, London, United Kingdom.
Siberian Branch of the Russian Academy of Sciences · RUInstitute of Biological, Environmental and Rural Sciences · GBInstitute of Cytology and Genetics · RURoyal Veterinary College · GBTeesside University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAdvances in genetic tools applied to livestock breeding has prompted research into the previously neglected breeds adapted to harsh local environments. One such group is the Welsh mountain sheep breeds, which can be farmed at altitudes of 300 m above sea level but are considered to have a low productive value because of their poor wool quality and small carcass size. This is contrary to the lowland breeds which are more suited to wool and meat production qualities, but do not fare well on upland pasture. Herein, medium-density genotyping data from 317 individuals representing 15 Welsh sheep breeds were used alongside the whole-genome resequencing data of 14 breeds from the same set to scan for the signatures of selection and candidate genetic variants using haplotype- and SNP-based approaches.

resultsHaplotype-based selection scan performed on the genotyping data pointed to a strong selection in the regions of

conclusionWe found new variants in genes with potentially functional consequences to the adaptation of local sheep to their environments in Wales. Knowledge of these variations is important for improving the adaptative qualities of UK and world sheep breeds through a marker-assisted selection.

Indexed as

adaptationsheepsignatures of selectionWaleswhole-genome resequencing

Identifiers

PMID34220925
PMCPMC8253514
OpenAlexW3174624410

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.