Evidence map›Paper›PMID 34220899›Full record

ArticleFrontiers in plant science2021

Transcriptome Analysis of Resistance to Fusarium Wilt in Mung Bean (

Yujie Chang, Feifei Sun, Suli Sun, Lanfen Wang, Jing Wu, Zhendong Zhu

Abstract read
In one paragraph

Article in Frontiers in plant science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
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  7. The melonPlant direct · 2024
    Article
  8. Comparative response mechanisms of two cultivars ofFrontiers in plant science · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Resistant cumin cultivar, GC-4 countersFrontiers in plant science · 2023
    Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yujie ChangInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
Feifei SunInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
Suli SunInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
Lanfen WangInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
Jing WuInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.
Zhendong ZhuInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fusarium wilt is a destructive soil-borne disease that threatens the production of mung bean. Mung bean lines Zheng8-4 and Zheng8-20 show high resistance and high susceptibility to Fusarium wilt, respectively. Transcriptome analysis was carried out to identify candidate genes involved in Fusarium wilt resistance using Zheng8-4 and Zheng8-20 at 0, 0.5, 1, 2, and 4 days post inoculation (dpi). Differential expression analysis showed that 3,254 genes responded to pathogen infection and were differentially expressed in the resistant and susceptible lines. Weighted gene co-expression network analysis (WGCNA) was also performed to identify five modules highly correlated with Fusarium wilt resistance, in which 453 differentially expressed genes (DEGs) were considered likely to be involved in Fusarium wilt resistance. Among these DEGs, we found 24 genes encoding resistance (R) proteins, 22 encoding protein kinases, 20 belonging to transcription factor families, 34 encoding proteins with oxidoreductase activity, 17 involved in stimulation/stress responses, and 54 annotated to pathogen resistance-related pathways. Finally, 27 annotated genes were further selected as candidate genes of Fusarium wilt resistance in mung bean. This study identifies novel potential resistance-related genes against Fusarium wilt and provides a theoretical basis for further investigation of Fusarium wilt resistance in mung bean breeding.

Indexed as

Fusarium wiltmung beanplant resistanceRNA-seqWGCNA

Identifiers

PMID34220899
PMCPMC8249807

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.