Evidence map›Paper›PMID 34220894›Full record

ArticleFrontiers in plant science2021

Wheat Spike Blast Image Classification Using Deep Convolutional Neural Networks.

Mariela Fernández-Campos, Yu-Ting Huang, Mohammad R Jahanshahi, Tao Wang, Jian Jin, Darcy E P Telenko, Carlos Góngora-Canul, C D Cruz

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 2 countries.

Mariela Fernández-CamposDepartment of Botany and Plant Pathology, Purdue University, West Lafayette, IN, United States.
Yu-Ting HuangLyles School of Civil Engineering, Purdue University, West Lafayette, IN, United States.
Mohammad R JahanshahiLyles School of Civil Engineering, Purdue University, West Lafayette, IN, United States.
Tao WangDepartment of Agricultural and Biological Engineering, Purdue University, West Lafayette, IN, United States.
Jian JinDepartment of Agricultural and Biological Engineering, Purdue University, West Lafayette, IN, United States.
Darcy E P TelenkoDepartment of Botany and Plant Pathology, Purdue University, West Lafayette, IN, United States.
Carlos Góngora-CanulDepartment of Botany and Plant Pathology, Purdue University, West Lafayette, IN, United States.
C D CruzDepartment of Botany and Plant Pathology, Purdue University, West Lafayette, IN, United States.
Purdue University West Lafayette · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Wheat blast is a threat to global wheat production, and limited blast-resistant cultivars are available. The current estimations of wheat spike blast severity rely on human assessments, but this technique could have limitations. Reliable visual disease estimations paired with Red Green Blue (RGB) images of wheat spike blast can be used to train deep convolutional neural networks (CNN) for disease severity (DS) classification. Inter-rater agreement analysis was used to measure the reliability of who collected and classified data obtained under controlled conditions. We then trained CNN models to classify wheat spike blast severity. Inter-rater agreement analysis showed high accuracy and low bias before model training. Results showed that the CNN models trained provide a promising approach to classify images in the three wheat blast severity categories. However, the models trained on non-matured and matured spikes images showing the highest precision, recall, and F1 score when classifying the images. The high classification accuracy could serve as a basis to facilitate wheat spike blast phenotyping in the future.

Indexed as

breedingcontrolled conditionsconvolutional neural networksdeep learninginter-rater agreementplant disease phenotypingseverity classificationwheat blast

Identifiers

PMID34220894
PMCPMC8248543
OpenAlexW3174812049

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.