Evidence map›Paper›PMID 34220869›Full record

ArticleFrontiers in immunology2021

Targeted Transcriptomics of Frog Virus 3 in Infected Frog Tissues Reveal Non-Coding Regulatory Elements and microRNAs in the Ranaviral Genome and Their Potential Interaction with Host Immune Response.

Yun Tian, Collins N Khwatenge, Jiuyi Li, Francisco De Jesus Andino, Jacques Robert, Yongming Sang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Current issues in molecular biology · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yun TianDepartment of Agricultural and Environmental Sciences, College of Agriculture, Tennessee State University, Nashville, TN, United States.
Collins N KhwatengeDepartment of Agricultural and Environmental Sciences, College of Agriculture, Tennessee State University, Nashville, TN, United States.
Jiuyi LiDepartment of Agricultural and Environmental Sciences, College of Agriculture, Tennessee State University, Nashville, TN, United States.
Francisco De Jesus AndinoDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY, United States.
Jacques RobertDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY, United States.
Yongming SangDepartment of Agricultural and Environmental Sciences, College of Agriculture, Tennessee State University, Nashville, TN, United States.
Tennessee State University · USUniversity of Rochester Medical Center · US

Funding

A Xenopus Laevis Research Resource for ImmunologyR24AI059830 · NIAID · UNIVERSITY OF ROCHESTER · PI JACQUES Robert · 2004 to 2026
$7.7M
NIAID NIH HHS R24 AI059830
6 · The paper itself

Abstract

Background: Frog Virus 3 (FV3) is a large dsDNA virus belonging to Ranaviruses of family Results: Using a whole transcriptomic analysis of total RNA samples containing both the viral and cellular transcripts from FV3-infected frog tissues, we detected virus-specific reads mapping in non-coding intergenic regions, in addition to reads from coding genes. Further analyses identified multiple Conclusions: Using the FV3 model, this study provides a first genome-wide analysis of non-coding regulatory mechanisms adopted by ranaviruses to epigenetically regulate both viral and host gene expressions, which have co-evolved to interact especially with the host IFN response.

Indexed as

Gene Expression Regulation, Viral3' Untranslated RegionsAnimalsDNA, IntergenicDNA Virus InfectionsGenome, ViralHost-Pathogen InteractionsInterferon Regulatory FactorsMicroRNAsRanavirusRandom AllocationReceptors, InterferonRNA InterferenceRNA, ViralSpecific Pathogen-Free OrganismsTranscriptome3' Untranslated RegionsDNA, IntergenicInterferon Regulatory FactorsMicroRNAsReceptors, InterferonRNA, Viralcis-regulatory elementsfrog virus 3interferon signalingmicroRNAranavirustranscriptome

Identifiers

PMID34220869
PMCPMC8248673
OpenAlexW3162143124

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.