Evidence map›Paper›PMID 34217893›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2021

Adenine base editing reduces misfolded protein accumulation and toxicity in alpha-1 antitrypsin deficient patient iPSC-hepatocytes.

Rhiannon B Werder, Joseph E Kaserman, Michael S Packer, Jonathan Lindstrom-Vautrin, Carlos Villacorta-Martin, Lauren E Young, Yvonne Aratyn-Schaus, Francine Gregoire, Andrew A Wilson

Open access · hybridAbstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Review
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  4. Long isoforms of the COPD risk gene FAM13A orchestrate human lung epithelial development.American journal of respiratory cell and molecular biology · 2026
    Article
  5. Article
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  8. A compact base editor rescues AATD-associated liver and lung disease in mouse models.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Article
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  10. Review
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  14. Review
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  16. Approaches to Therapeutic Gene Editing in Alpha-1 Antitrypsin Deficiency.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Rhiannon B WerderCenter for Regenerative Medicine of Boston University and Boston Medical Center, Boston, MA 02118, USA; The Pulmonary Center and Department of Medicine, Boston University School of Medicine, Boston, MA 02118, USA; QIMR Berghofer Medical Research Institute, Herston, QLD 4006, Australia.
Joseph E KasermanCenter for Regenerative Medicine of Boston University and Boston Medical Center, Boston, MA 02118, USA; The Pulmonary Center and Department of Medicine, Boston University School of Medicine, Boston, MA 02118, USA.
Michael S PackerBeam Therapeutics, Cambridge, MA 02139, USA.
Jonathan Lindstrom-VautrinCenter for Regenerative Medicine of Boston University and Boston Medical Center, Boston, MA 02118, USA.
Carlos Villacorta-MartinCenter for Regenerative Medicine of Boston University and Boston Medical Center, Boston, MA 02118, USA.
Lauren E YoungBeam Therapeutics, Cambridge, MA 02139, USA.
Yvonne Aratyn-SchausBeam Therapeutics, Cambridge, MA 02139, USA.
Francine GregoireBeam Therapeutics, Cambridge, MA 02139, USA.
Andrew A WilsonCenter for Regenerative Medicine of Boston University and Boston Medical Center, Boston, MA 02118, USA; The Pulmonary Center and Department of Medicine, Boston University School of Medicine, Boston, MA 02118, USA. Electronic address: awilson@bu.edu.
Beam Therapeutics (United States) · USBoston University · USBoston Medical Center · US

Funding

A National iPS Cell Network with Deep Phenotyping for Translational ResearchU01TR001810 · NCATS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI GILAD, YOAV, KOTTON, DARRELL N. · 2016 to 2020
$4.4M
Thyroid Hormone Signaling in Human HepatocytesR01DK117940 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI HOLLENBERG, ANTHONY N, WILSON, ANDREW A · 2019 to 2022
$2.7M
Personalized therapy for AATD-associated liver disease via IPS modelingR01DK101501 · NIDDK · BOSTON UNIVERSITY MEDICAL CAMPUS · PI WILSON, ANDREW A · 2015 to 2019
$2.4M
MoFlo Astrios EQ High Speed Cell SorterS10OD021587 · OD · BOSTON UNIVERSITY MEDICAL CAMPUS · PI SNYDER-CAPPIONE, JENNIFER E · 2017 to 2017
$600k
NCATS NIH HHS U01 TR001810NIDDK NIH HHS R01 DK101501NIDDK NIH HHS R01 DK117940NIH HHS S10 OD021587
6 · The paper itself

Abstract

Alpha-1 antitrypsin deficiency (AATD) is most commonly caused by the Z mutation, a single-base substitution that leads to AAT protein misfolding and associated liver and lung disease. In this study, we apply adenine base editors to correct the Z mutation in patient induced pluripotent stem cells (iPSCs) and iPSC-derived hepatocytes (iHeps). We demonstrate that correction of the Z mutation in patient iPSCs reduces aberrant AAT accumulation and increases its secretion. Adenine base editing (ABE) of differentiated iHeps decreases ER stress in edited cells, as demonstrated by single-cell RNA sequencing. We find ABE to be highly efficient in iPSCs and do not identify off-target genomic mutations by whole-genome sequencing. These results reveal the feasibility and utility of base editing to correct the Z mutation in AATD patient cells.

Indexed as

AdenineCRISPR-Cas SystemsGene Editingalpha 1-Antitrypsinalpha 1-Antitrypsin DeficiencyBiomarkersCell DifferentiationCells, CulturedEndoplasmic Reticulum StressGene ExpressionHepatocytesHumansInduced Pluripotent Stem CellsMutationAdeninealpha 1-AntitrypsinBiomarkersadenine base editoralpha-1 antitrypsin deficiencybase edithepatocytehuman induced pluripotent stem cellsiHepiPSCsingle cell RNA sequencingwhole genome sequencing

Identifiers

PMID34217893
PMCPMC8571173
OpenAlexW3176387672

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.