Evidence map›Paper›PMID 34217211›Full record

ArticleBMC plant biology2021

Transcriptome and metabolomic analysis to reveal the browning spot formation of 'Huangguan' pear.

Qi Wang, Xinyi Wu, Li Liu, Daozhi Yao, Jinchao Li, Jie Fang, Xiaonan Chen, Liwu Zhu, Pu Liu, Zhenfeng Ye and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Unveiling the Molecular Mechanisms of Browning inInternational journal of molecular sciences · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Qi Wang *College of Horticulture, Anhui Agricultural University, Hefei, Anhui, 230036, P. R. China.
Xinyi Wu *College of Horticulture, Anhui Agricultural University, Hefei, Anhui, 230036, P. R. China.
Li Liu *College of Horticulture, Anhui Agricultural University, Hefei, Anhui, 230036, P. R. China.
Daozhi YaoCollege of Horticulture, Anhui Agricultural University, Hefei, Anhui, 230036, P. R. China.
Jinchao LiCollege of Horticulture, Anhui Agricultural University, Hefei, Anhui, 230036, P. R. China.
Jie FangCollege of Horticulture, Anhui Agricultural University, Hefei, Anhui, 230036, P. R. China.
Xiaonan ChenCollege of Horticulture, Anhui Agricultural University, Hefei, Anhui, 230036, P. R. China.
Liwu ZhuCollege of Horticulture, Anhui Agricultural University, Hefei, Anhui, 230036, P. R. China.
Pu LiuCollege of Horticulture, Anhui Agricultural University, Hefei, Anhui, 230036, P. R. China.
Zhenfeng YeCollege of Horticulture, Anhui Agricultural University, Hefei, Anhui, 230036, P. R. China.
Bing JiaCollege of Horticulture, Anhui Agricultural University, Hefei, Anhui, 230036, P. R. China. jb1977@ahau.edu.cn.
Wei HengCollege of Horticulture, Anhui Agricultural University, Hefei, Anhui, 230036, P. R. China. hengwei@ahau.edu.cn.
Anhui Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBrowning spot (BS) disorders seriously affect the appearance quality of 'Huangguan' pear and cause economic losses. Many studies on BS have mainly focused on physiological and biochemical aspects, and the molecular mechanism remains unclear.

resultsIn the present study, the structural characteristics of 'Huangguan' pear with BS were observed via scanning electron microscopy (SEM), the water loss and brown spots were evaluated, and transcriptomic and metabolomics analyses were conducted to reveal the molecular mechanism underlying 'Huangguan' pear skin browning disorder. The results showed that the occurrence of BS was accompanied by a decrease in the wax layer and an increase in lignified cells. Genes related to wax biosynthesis were downregulated in BS, resulting in a decrease in the wax layer in BS. Genes related to lignin were upregulated at the transcriptional level, resulting in upregulation of metabolites related to phenylpropanoid biosynthesis. Expression of calcium-related genes were upregulated in BS. Cold-induced genes may represent the key genes that induce the formation of BS. In addition, the results demonstrated that exogenous NaH

conclusionsThe results of this study indicate a molecular mechanism that could explain BS formation and elucidate the effects of different treatments on the incidence and molecular regulation of BS.

Indexed as

MetabolomicsAbscisic AcidGene Expression ProfilingGene Expression Regulation, PlantGene Regulatory NetworksGibberellinsMetabolomeModels, BiologicalPhenotypePlant DiseasesPyrusRNA, MessengerTranscription FactorsTranscriptomeAbscisic Acidgibberellic acidGibberellinsRNA, MessengerTranscription FactorsBrowning disorder‘Huangguan’ pearMetabolomicMolecular mechanismTranscriptome

Identifiers

PMID34217211
PMCPMC8255024
OpenAlexW3154209608

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.