Evidence map›Paper›PMID 34216322›Full record

ArticleMedical oncology (Northwood, London, England)2021

Analyzing the impact of ATF3 in tumorigenesis and immune cell infiltration of ovarian tumor: a bioinformatics study.

Xiaoliu Li, Panpan Liu, Xiaona Sun, Runhong Ma, Ting Cui, Ting Wang, Yang Bai, Yuxia Li, Xiujuan Wu, Xianling Feng

Abstract read
PubMed Publisher
In one paragraph

Article in Medical oncology (Northwood, London, England), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Induction of heparanase 2 (Hpa2) expression by stress is mediated by ATF3.Matrix biology : journal of the International Society for Matrix Biology · 2022
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Xiaoliu LiDepartment of Gynaecology, Henan Province People's Hospital, Zhengzhou University People's Hospital, Zhengzhou, 450003, Henan, China.
Panpan LiuDepartment of Gynaecology, Henan Province People's Hospital, Zhengzhou University People's Hospital, Zhengzhou, 450003, Henan, China.
Xiaona SunDepartment of Gynaecology, Henan Province People's Hospital, Zhengzhou University People's Hospital, Zhengzhou, 450003, Henan, China.
Runhong MaDepartment of Gynaecology, Henan Province People's Hospital, Zhengzhou University People's Hospital, Zhengzhou, 450003, Henan, China.
Ting CuiDepartment of Gynaecology, Henan Province People's Hospital, Zhengzhou University People's Hospital, Zhengzhou, 450003, Henan, China.
Ting WangDepartment of Gynaecology, Henan Province People's Hospital, Zhengzhou University People's Hospital, Zhengzhou, 450003, Henan, China.
Yang BaiDepartment of Gynaecology, Henan Province People's Hospital, Zhengzhou University People's Hospital, Zhengzhou, 450003, Henan, China.
Yuxia LiDepartment of Gynaecology, Henan Province People's Hospital, Zhengzhou University People's Hospital, Zhengzhou, 450003, Henan, China.
Xiujuan WuSchool of Life Sciences, Henan University, Kaifeng, 475000, Henan, China. whg_2018@henu.edu.cn.ORCID http://orcid.org/0000-0002-3045-6370
Xianling FengDepartment of Gynaecology, Henan Province People's Hospital, Zhengzhou University People's Hospital, Zhengzhou, 450003, Henan, China. fengxianling@126.com.
Zhengzhou University · CNHenan University · CN

Funding

science and technology department of henan province LHGJ20200035
6 · The paper itself

Abstract

ATF3 is an essential transcription activator in regulating cancer-related genetic expression. To identify the role of ATF3 in ovarian tumor, we investigated the correlation between ATF3 expression and the clinicopathological properties using multiple database. The cBioPortal and GEPIA database displayed the clinical information of ovarian patients harboring or without harboring ATF3 mutation. Furthermore, we assessed the relationship between survival and ATF3 expression level using Kaplan-Meier plotter, which reveals that the ovarian patients with higher expression of ATF3 suffered the worse overall survival and progression-free survival. The differentially expressed genes were analyzed using gene ontology, protein-protein interaction network, and gene set enrichment analysis to identify the hub gene and critical pathways, significantly affecting the tumorigenesis of ovarian tumor. Finally, we assessed the correlation between ATF3 and immune cell infiltration using Tumor Immunoassay Resource (TIMER) database. The results demonstrated that higher expression has a positive correlation with macrophage infiltration, expression for M1- and M2-type macrophages. Our study suggests that ATF3 can regulate the cell cycle and heme-related oxidative phosphorylation process, and it may be a critical factor to regulate the macrophage cell to be infiltrated into ovarian cancer. ATF3 can be used as a biomarker for diagnosis and therapy of ovarian tumor.

Indexed as

Activating Transcription Factor 3AdultAgedAged, 80 and overBiomarkers, TumorCarcinogenesisComputational BiologyDatabases, GeneticFemaleHumansMacrophagesMiddle AgedOvarian NeoplasmsProtein Interaction MapsActivating Transcription Factor 3ATF3 protein, humanBiomarkers, TumorATF3Bioinformatical analysisImmune cell infiltrationOvarian

Identifiers

PMID34216322
OpenAlexW3160855335

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.