Evidence map›Paper›PMID 34216059›Full record

ArticleProtein science : a publication of the Protein Society2022

DichroWeb, a website for calculating protein secondary structure from circular dichroism spectroscopic data.

Andrew J Miles, Sergio G Ramalli, B A Wallace

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 191 papers.

0numbers the graph read from it
0cells of the map it votes in
191citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

191 citing papers in PubMed.

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131 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Andrew J MilesInstitute of Structural and Molecular Biology, Birkbeck University of London, London, UK.ORCID 0000-0002-5547-249X
Sergio G RamalliInstitute of Structural and Molecular Biology, Birkbeck University of London, London, UK.ORCID 0000-0001-5179-3483
B A WallaceInstitute of Structural and Molecular Biology, Birkbeck University of London, London, UK.ORCID 0000-0001-9649-5092

Funding

Biotechnology and Biological Sciences Research Council BB/P024092
6 · The paper itself

Abstract

Circular dichroism (CD) spectroscopy is a widely-used method for characterizing the secondary structures of proteins. The well-established and highly used analysis website, DichroWeb (located at: http://dichroweb.cryst.bbk.ac.uk/html/home.shtml) enables the facile quantitative determination of helix, sheet, and other secondary structure contents of proteins based on their CD spectra. DichroWeb includes a range of reference datasets and algorithms, plus graphical and quantitative methods for determining the quality of the analyses produced. This article describes the current website content, usage and accessibility, as well as the many upgraded features now present in this highly popular tool that was originally created nearly two decades ago.

Indexed as

AlgorithmsDatabases, ProteinSoftwareCircular DichroismProteinsProtein Structure, SecondaryProteinsbioinformaticscalculationscircular dichroism spectroscopydata analysesdisordered structureprotein secondary structurereference datasetssoluble and membrane proteinsα-helixβ-sheet

Identifiers

PMID34216059
PMCPMC8740839

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.