Evidence map›Paper›PMID 34215937›Full record

ArticleCurrent microbiology2021

Bacterial Community Coexisting with White-Rot Fungi in Decayed Wood in Nature.

Yosuke Iimura, Hisashi Abe, Yuichiro Otsuka, Yuya Sato, Hiroshi Habe

Abstract read
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In one paragraph

Article in Current microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Ensiling Improved the Colonization and Degradation Ability ofInternational journal of environmental research and public health · 2022
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yosuke IimuraEnvironmental Management Research Institute, National Institute of Advanced Industrial Science and Technology, Onogawa 16-1, Tsukuba, Ibaraki, 305-8569, Japan. y.iimura@aist.go.jp.ORCID http://orcid.org/0000-0001-5417-6552
Hisashi AbeForestry and Forest Products Research Institute, Matsunosato 1, Tsukuba, Ibaraki, 305-8687, Japan.
Yuichiro OtsukaForestry and Forest Products Research Institute, Matsunosato 1, Tsukuba, Ibaraki, 305-8687, Japan.
Yuya SatoEnvironmental Management Research Institute, National Institute of Advanced Industrial Science and Technology, Onogawa 16-1, Tsukuba, Ibaraki, 305-8569, Japan.
Hiroshi HabeEnvironmental Management Research Institute, National Institute of Advanced Industrial Science and Technology, Onogawa 16-1, Tsukuba, Ibaraki, 305-8569, Japan.
National Institute of Advanced Industrial Science and Technology · JPForestry and Forest Products Research Institute · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lignin-decomposing ability of several bacteria and the degradation mechanism have been revealed in vitro. However, the abundance of such bacteria in decayed wood in nature remains unknown at genus and species levels. This study was aimed at identifying bacterial communities in the decayed wood coexisting with white-rot fungi, which play a potential role in lignin degradation, and predicting the functional profile of bacterial lignin degradation in wood via bacterial community analyses. The bacterial flora of forest soil and four decayed wood samples showed marked differences; particularly, in addition to Methylobacterium and Acidibrevibacterium, sphingomonads, which degrade the major skeleton of lignin in vitro, were more abundant in the decayed wood than in forest soil, suggesting that multiple bacteria were involved in lignin degradation. The bacterial community in the decayed wood was more influenced by wood type and lignin structure than the fungal species observed in the decayed wood.

Indexed as

BasidiomycotaWoodBacteriaFungiLigninLignin

Identifiers

PMID34215937
OpenAlexW3177302838

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.