Evidence map›Paper›PMID 34215774›Full record

ArticleScientific reports2021

Forward and backward locomotion patterns in C. elegans generated by a connectome-based model simulation.

Kazuma Sakamoto, Zu Soh, Michiyo Suzuki, Yuichi Iino, Toshio Tsuji

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Acrylamide Neurotoxicity Studies inAntioxidants (Basel, Switzerland) · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. A complete biomechanical model ofProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Kazuma SakamotoDepartment of System Cybernetics, Graduate School of Engineering, Hiroshima University, Higashi-Hiroshima, Hiroshima, Japan.
Zu SohGraduate School of Advanced Science and Engineering, Hiroshima University, Higashi-Hiroshima, Hiroshima, Japan. sozu@hiroshima-u.ac.jp.ORCID 0000-0001-7182-9383
Michiyo SuzukiDepartment of Radiation-Applied Biology Research, National Institutes for Quantum and Radiological Science and Technology, Takasaki, Gunma, Japan.ORCID 0000-0002-6207-8474
Yuichi IinoDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.ORCID 0000-0002-0936-2660
Toshio TsujiGraduate School of Advanced Science and Engineering, Hiroshima University, Higashi-Hiroshima, Hiroshima, Japan. tsuji@bsys.hiroshima-u.ac.jp.ORCID 0000-0002-7689-3963

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Caenorhabditis elegans (C. elegans) can produce various motion patterns despite having only 69 motor neurons and 95 muscle cells. Previous studies successfully elucidate the connectome and role of the respective motor neuron classes related to movement. However, these models have not analyzed the distribution of the synaptic and gap connection weights. In this study, we examined whether a motor neuron and muscle network can generate oscillations for both forward and backward movement and analyzed the distribution of the trained synaptic and gap connection weights through a machine learning approach. This paper presents a connectome-based neural network model consisting of motor neurons of classes A, B, D, AS, and muscle, considering both synaptic and gap connections. A supervised learning method called backpropagation through time was adapted to train the connection parameters by feeding teacher data composed of the command neuron input and muscle cell activation. Simulation results confirmed that the motor neuron circuit could generate oscillations with different phase patterns corresponding to forward and backward movement, and could be switched at arbitrary times according to the binary inputs simulating the output of command neurons. Subsequently, we confirmed that the trained synaptic and gap connection weights followed a Boltzmann-type distribution. It should be noted that the proposed model can be trained to reproduce the activity patterns measured for an animal (HRB4 strain). Therefore, the supervised learning approach adopted in this study may allow further analysis of complex activity patterns associated with movements.

Indexed as

ConnectomeAnimalsCaenorhabditis elegansComputer SimulationLocomotionModels, NeurologicalMotor NeuronsMuscle CellsNerve Net

Identifiers

PMID34215774
PMCPMC8253844

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.