Evidence map›Paper›PMID 34215621›Full record

ArticleCancer research2021

Quantitative

Chuan Li, Wen-Yang Lin, Hira Rizvi, Hongchen Cai, Christopher D McFarland, Zoe N Rogers, Maryam Yousefi, Ian P Winters, Charles M Rudin, Dmitri A Petrov and 1 more

Abstract read
In one paragraph

Article in Cancer research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Fully accessible fitness landscape of oncogene-negative lung adenocarcinoma.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  10. Review
  11. Review
  12. Applications of CRISPR screening to lung cancer treatment.Frontiers in cell and developmental biology · 2023
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Chuan Li *Department of Biology, Stanford University, Stanford, California.ORCID 0000-0002-4381-3891
Wen-Yang Lin *Department of Genetics, Stanford University School of Medicine, Stanford, California.
Hira RizviDruckenmiller Center for Lung Cancer Research, Memorial Sloan Kettering Cancer Center, New York, New York.
Hongchen CaiDepartment of Genetics, Stanford University School of Medicine, Stanford, California.ORCID 0000-0002-5921-5773
Christopher D McFarlandDepartment of Biology, Stanford University, Stanford, California.
Zoe N RogersDepartment of Genetics, Stanford University School of Medicine, Stanford, California.
Maryam YousefiDepartment of Genetics, Stanford University School of Medicine, Stanford, California.
Ian P WintersDepartment of Genetics, Stanford University School of Medicine, Stanford, California.ORCID 0000-0002-3497-3228
Charles M RudinDepartment of Medicine, Thoracic Oncology Service, Memorial Sloan Kettering Cancer Center, New York, New York.ORCID 0000-0001-5204-3465
Dmitri A PetrovDepartment of Biology, Stanford University, Stanford, California. mwinslow@stanford.edu dpetrov@stanford.edu.
Monte M Winslow *Department of Genetics, Stanford University School of Medicine, Stanford, California. mwinslow@stanford.edu dpetrov@stanford.edu.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Genomics of rapid adaptation in the lab and in the wildR35GM118165 · NIGMS · STANFORD UNIVERSITY · PI Dmitri Petrov · 2016 to 2026
$8.3M
Identification and validation of synthetic lethality in KRAS mutant lung adenocarcinoma patient derived xenograftsU01CA199215 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI POIRIER, JOHN THOMAS, RUDIN, CHARLES M. · 2015 to 2019
$2.7M
Unraveling mechanisms of tumor suppression in lung cancerR01CA234349 · NCI · STANFORD UNIVERSITY · PI PETROV, DMITRI, WINSLOW, MONTE MEIER · 2019 to 2023
$2.4M
(PQ4) Quantitative and multiplexed analysis of gene function in cancer in vivoR01CA231253 · NCI · STANFORD UNIVERSITY · PI PETROV, DMITRI, WINSLOW, MONTE MEIER · 2018 to 2022
$2.3M
A Quantitative Multiplexed Platform for the Pharmacogenomic Analysis of Lung CancerR01CA207133 · NCI · STANFORD UNIVERSITY · PI PETROV, DMITRI, WINSLOW, MONTE MEIER · 2016 to 2018
$1.7M
Quantifying the sources and dynamics of tumor growth variability using Tuba-seqK99CA226506 · NCI · STANFORD UNIVERSITY · PI MCFARLAND, CHRISTOPHER DENNIS · 2018 to 2019
$202k
Therapeutic dissection of genotype-specific lung cancer vulnerabilitiesF32CA236311 · NCI · STANFORD UNIVERSITY · PI YOUSEFI, MARYAM · 2019 to 2021
$169k
Functional Interrogation of Kdm6a-Dependent Tumor Suppression during Pancreatic CancerF31CA210627 · NCI · STANFORD UNIVERSITY · PI WINTERS, IAN PAUL · 2016 to 2017
$64k
NCI NIH HHS F31 CA210627NCI NIH HHS F32 CA236311NCI NIH HHS K99 CA226506NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA207133NCI NIH HHS R01 CA231253NCI NIH HHS R01 CA234349NCI NIH HHS U01 CA199215NIGMS NIH HHS R35 GM118165
6 · The paper itself

Abstract

The lack of knowledge about the relationship between tumor genotypes and therapeutic responses remains one of the most critical gaps in enabling the effective use of cancer therapies. Here, we couple a multiplexed and quantitative experimental platform with robust statistical methods to enable pharmacogenomic mapping of lung cancer treatment responses

Indexed as

PharmacogeneticsAdenocarcinoma of LungAnimalsDrug Resistance, NeoplasmGene Expression Regulation, NeoplasticGene LibraryGenes, Tumor SuppressorGenotypeHumansKelch-Like ECH-Associated Protein 1Lung NeoplasmsMiceMutationNeoplasm MetastasisKEAP1 protein, humanKelch-Like ECH-Associated Protein 1

Identifiers

PMID34215621
PMCPMC8416777

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.