Evidence map›Paper›PMID 34215582›Full record

ArticleScience advances2021

COUP-TFI specifies the medial entorhinal cortex identity and induces differential cell adhesion to determine the integrity of its boundary with neocortex.

Jia Feng, Wen-Hsin Hsu, Denis Patterson, Ching-San Tseng, Hsiang-Wei Hsing, Zi-Hui Zhuang, Yi-Ting Huang, Andrea Faedo, John L Rubenstein, Jonathan Touboul and 1 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Geometric influences on the regional organization of the mammalian brain.bioRxiv : the preprint server for biology · 2025
    Article
  4. Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Adhesion-Based Self-Organization in Tissue Patterning.Annual review of cell and developmental biology · 2022
    Review
  9. Structural and Functional Aspects of the Neurodevelopmental GeneFrontiers in molecular neuroscience · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Jia FengInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.ORCID 0000-0002-9134-6108
Wen-Hsin HsuInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.ORCID 0000-0001-8143-8554
Denis PattersonDepartment of Mathematics and Volen National Center for Complex Systems, Brandeis University, Waltham, MA 02454, USA.ORCID 0000-0002-4509-7294
Ching-San TsengInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Hsiang-Wei HsingInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Zi-Hui ZhuangInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Yi-Ting HuangInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Andrea FaedoNina Ireland Laboratory of Developmental Neurobiology, Department of Psychiatry, UCSF Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, CA 94158, USA.ORCID 0000-0002-2227-0656
John L RubensteinNina Ireland Laboratory of Developmental Neurobiology, Department of Psychiatry, UCSF Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, CA 94158, USA.
Jonathan TouboulDepartment of Mathematics and Volen National Center for Complex Systems, Brandeis University, Waltham, MA 02454, USA.
Shen-Ju ChouInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan. schou@gate.sinica.edu.tw.ORCID 0000-0002-4103-7286
Institute of Cellular and Organismic Biology, Academia Sinica · TWBrandeis University · USUniversity of California, San Francisco · US

Funding

Genetic Studies of Cortex Structure and DevelopmentR01NS099099 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI RUBENSTEIN, JOHN L. R. · 2016 to 2025
$6.4M
NINDS NIH HHS R01 NS099099
6 · The paper itself

Abstract

Development of cortical regions with precise, sharp, and regular boundaries is essential for physiological function. However, little is known of the mechanisms ensuring these features. Here, we show that determination of the boundary between neocortex and medial entorhinal cortex (MEC), two abutting cortical regions generated from the same progenitor lineage, relies on COUP-TFI (chicken ovalbumin upstream promoter-transcription factor I), a patterning transcription factor with graded expression in cortical progenitors. In contrast with the classical paradigm, we found that increased COUP-TFI expression expands MEC, creating protrusions and disconnected ectopic tissue. We further developed a mathematical model that predicts that neuronal specification and differential cell affinity contribute to the emergence of an instability region and boundary sharpness. Correspondingly, we demonstrated that high expression of COUP-TFI induces MEC cell fate and protocadherin 19 expression. Thus, we conclude that a sharp boundary requires a subtle interplay between patterning transcription factors and differential cell affinity.

Indexed as

NeocortexCell AdhesionCOUP Transcription Factor IEntorhinal CortexTranscription FactorsCOUP Transcription Factor ITranscription Factors

Identifiers

PMID34215582
PMCPMC11057786
OpenAlexW3175635737

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.