Evidence map›Paper›PMID 34215314›Full record

ArticleEpigenetics & chromatin2021

AF10 (MLLT10) prevents somatic cell reprogramming through regulation of DOT1L-mediated H3K79 methylation.

Deniz Uğurlu-Çimen, Deniz Odluyurt, Kenan Sevinç, Nazlı Ezgi Özkan-Küçük, Burcu Özçimen, Deniz Demirtaş, Eray Enüstün, Can Aztekin, Martin Philpott, Udo Oppermann and 2 more

Open access · goldAbstract read
In one paragraph

Article in Epigenetics & chromatin, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
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  11. Phenotypic Chemical Screening in CD4Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  12. Article
  13. Signals for antigen-independent differentiation of memory CD8Cellular and molecular life sciences : CMLS · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Deniz Uğurlu-ÇimenSchool of Medicine, Koc University, Istanbul, 34450, Turkey.
Deniz OdluyurtSchool of Medicine, Koc University, Istanbul, 34450, Turkey.
Kenan SevinçSchool of Medicine, Koc University, Istanbul, 34450, Turkey.
Nazlı Ezgi Özkan-KüçükDepartment of Molecular Biology and Genetics, Koc University, Istanbul, 34450, Turkey.
Burcu ÖzçimenSchool of Medicine, Koc University, Istanbul, 34450, Turkey.
Deniz DemirtaşSchool of Medicine, Koc University, Istanbul, 34450, Turkey.
Eray EnüstünSchool of Medicine, Koc University, Istanbul, 34450, Turkey.
Can AztekinSchool of Medicine, Koc University, Istanbul, 34450, Turkey.
Martin PhilpottBotnar Research Centre, University of Oxford, Oxford, UK.
Udo OppermannBotnar Research Centre, University of Oxford, Oxford, UK.
Nurhan ÖzlüDepartment of Molecular Biology and Genetics, Koc University, Istanbul, 34450, Turkey.
Tamer T ÖnderSchool of Medicine, Koc University, Istanbul, 34450, Turkey. tonder@ku.edu.tr.ORCID 0000-0002-2372-9158
Koç University · TRUniversity of Oxford · GB

Funding

Cancer Research UKVersus Arthritis 20522
6 · The paper itself

Abstract

backgroundThe histone H3 lysine 79 (H3K79) methyltransferase DOT1L is a key chromatin-based barrier to somatic cell reprogramming. However, the mechanisms by which DOT1L safeguards cell identity and somatic-specific transcriptional programs remain unknown.

resultsWe employed a proteomic approach using proximity-based labeling to identify DOT1L-interacting proteins and investigated their effects on reprogramming. Among DOT1L interactors, suppression of AF10 (MLLT10) via RNA interference or CRISPR/Cas9, significantly increases reprogramming efficiency. In somatic cells and induced pluripotent stem cells (iPSCs) higher order H3K79 methylation is dependent on AF10 expression. In AF10 knock-out cells, re-expression wild-type AF10, but not a DOT1L binding-impaired mutant, rescues overall H3K79 methylation and reduces reprogramming efficiency. Transcriptomic analyses during reprogramming show that AF10 suppression results in downregulation of fibroblast-specific genes and accelerates the activation of pluripotency-associated genes.

conclusionsOur findings establish AF10 as a novel barrier to reprogramming by regulating H3K79 methylation and thereby sheds light on the mechanism by which cell identity is maintained in somatic cells.

Indexed as

Cellular ReprogrammingHistone-Lysine N-MethyltransferaseTranscription FactorsHEK293 CellsHumansMethylationProteomicsDOT1L protein, humanHistone-Lysine N-MethyltransferaseMLLT10 protein, humanTranscription FactorsAF10BioIDDOT1LH3K79 methylationiPSCReprogramming

Identifiers

PMID34215314
PMCPMC8254283
OpenAlexW3176781028

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.