Evidence map›Paper›PMID 34214958›Full record

ArticleMedical image analysis2021

Tetrahedral spectral feature-Based bayesian manifold learning for grey matter morphometry: Findings from the Alzheimer's disease neuroimaging initiative.

Yonghui Fan, Gang Wang, Qunxi Dong, Yuxiang Liu, Natasha Leporé, Yalin Wang

Open access · greenAbstract read
In one paragraph

Article in Medical image analysis, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Yonghui FanSchool of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, USA.
Gang WangSchool of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, USA; School of Information and Electrical Engineering, Ludong University, Yantai, China.
Qunxi DongSchool of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, USA.
Yuxiang LiuSchool of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, USA.
Natasha LeporéCIBORG Lab, Department of Radiology Children's Hospital Los Angeles, Los Angeles, CA, USA.
Yalin WangSchool of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, USA. Electronic address: ylwang@asu.edu.
Arizona State University · USChildren's Hospital of Los Angeles · USDecision Systems (United States) · USLudong University · CN

Funding

Alzheimer's Disease Neuroimaging Initiative - SupplementU01AG024904 · NIA · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI WEINER, MICHAEL W · 2004 to 2015
$121.0M
Multi-Source Sparse Learning to Identify MCI and Predict DeclineRF1AG051710 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI THOMPSON, PAUL M, WANG, YALIN · 2016 to 2016
$2.8M
Predicting the early childhood outcomes of preterm brain shape abnormalitiesR01EB025032 · NIBIB · CHILDREN'S HOSPITAL OF LOS ANGELES · PI LEPORE, NATASHA · 2017 to 2020
$2.6M
Developing a Univariate Neurodegeneration Imaging Biomarker with Optimal TransportationR21AG065942 · NIA · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI WANG, YALIN · 2020 to 2020
$445k
CIHRNIA NIH HHS R21 AG065942NIA NIH HHS RF1 AG051710NIA NIH HHS U01 AG024904NIBIB NIH HHS R01 EB025032
6 · The paper itself

Abstract

Structural and anatomical analyses of magnetic resonance imaging (MRI) data often require a reconstruction of the three-dimensional anatomy to a statistical shape model. Our prior work demonstrated the usefulness of tetrahedral spectral features for grey matter morphometry. However, most of the current methods provide a large number of descriptive shape features, but lack an unsupervised scheme to automatically extract a concise set of features with clear biological interpretations and that also carries strong statistical power. Here we introduce a new tetrahedral spectral feature-based Bayesian manifold learning framework for effective statistical analysis of grey matter morphology. We start by solving the technical issue of generating tetrahedral meshes which preserve the details of the grey matter geometry. We then derive explicit weak-form tetrahedral discretizations of the Hamiltonian operator (HO) and the Laplace-Beltrami operator (LBO). Next, the Schrödinger's equation is solved for constructing the scale-invariant wave kernel signature (SIWKS) as the shape descriptor. By solving the heat equation and utilizing the SIWKS, we design a morphometric Gaussian process (M-GP) regression framework and an active learning strategy to select landmarks as concrete shape descriptors. We evaluate the proposed system on publicly available data from the Alzheimers Disease Neuroimaging Initiative (ADNI), using subjects structural MRI covering the range from cognitively unimpaired (CU) to full blown Alzheimer's disease (AD). Our analyses suggest that the SIWKS and M-GP compare favorably with seven other baseline algorithms to obtain grey matter morphometry-based diagnoses. Our work may inspire more tetrahedral spectral feature-based Bayesian learning research in medical image analysis.

Indexed as

Alzheimer DiseaseCognitive DysfunctionBayes TheoremBrainGray MatterHumansMagnetic Resonance ImagingNeuroimagingAlzheimer’S diseaseBayesian manifold learningMagnetic resonance imaging (MRI)Spectral shape analysisTetrahedral mesh

Identifiers

PMID34214958
PMCPMC8316398
OpenAlexW3171948477

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.