Evidence map›Paper›PMID 34214531›Full record

ArticleBiophysical journal2021

Spatiotemporal dynamics of growth and death within spherical bacterial colonies.

Anton Welker, Marc Hennes, Niklas Bender, Tom Cronenberg, Gabriele Schneider, Berenike Maier

Abstract read
In one paragraph

Article in Biophysical journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Uncoupling growth and division inISME communications · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Regulating Bacterial Behavior within Hydrogels of Tunable Viscoelasticity.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Anton WelkerInstitute for Biological Physics and Center for Molecular Medicine Cologne, University of Cologne, Köln, Germany.
Marc HennesInstitute for Biological Physics and Center for Molecular Medicine Cologne, University of Cologne, Köln, Germany.
Niklas BenderInstitute for Biological Physics and Center for Molecular Medicine Cologne, University of Cologne, Köln, Germany.
Tom CronenbergInstitute for Biological Physics and Center for Molecular Medicine Cologne, University of Cologne, Köln, Germany.
Gabriele SchneiderInstitute for Biological Physics and Center for Molecular Medicine Cologne, University of Cologne, Köln, Germany.
Berenike MaierInstitute for Biological Physics and Center for Molecular Medicine Cologne, University of Cologne, Köln, Germany. Electronic address: berenike.maier@uni-koeln.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial growth within colonies and biofilms is heterogeneous. Local reduction of growth rates has been associated with tolerance against various antibiotics. However, spatial gradients of growth rates are poorly characterized in three-dimensional bacterial colonies. Here, we report two spatially resolved methods for measuring growth rates in bacterial colonies. As bacteria grow and divide, they generate a velocity field that is directly related to the growth rates. We derive profiles of growth rates from the velocity field and show that they are consistent with the profiles obtained by single-cell-counting. Using these methods, we reveal that even small colonies initiated with a few thousand cells of the human pathogen Neisseria gonorrhoeae develop a steep gradient of growth rates within two generations. Furthermore, we show that stringent response decelerates growth inhibition at the colony center. Based on our results, we suggest that aggregation-related growth inhibition can protect gonococci from external stresses even at early biofilm stages.

Indexed as

BiofilmsNeisseria gonorrhoeaeAnti-Bacterial AgentsHumansAnti-Bacterial Agents

Identifiers

PMID34214531
PMCPMC8391034

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.