Evidence map›Paper›PMID 34211095›Full record

ArticleCommunications biology2021

A convolutional neural-network framework for modelling auditory sensory cells and synapses.

Fotios Drakopoulos, Deepak Baby, Sarah Verhulst

Abstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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  12. A comparative study of eight human auditory models of monaural processing.Acta acustica. European Acoustics Association · 2022
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Fotios DrakopoulosDepartment of Information Technology, Ghent University, Ghent, Belgium. fotios.drakopoulos@ugent.be.ORCID 0000-0002-7286-4559
Deepak BabyDepartment of Information Technology, Ghent University, Ghent, Belgium.ORCID 0000-0001-8935-9068
Sarah VerhulstDepartment of Information Technology, Ghent University, Ghent, Belgium.ORCID 0000-0002-6498-7719

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In classical computational neuroscience, analytical model descriptions are derived from neuronal recordings to mimic the underlying biological system. These neuronal models are typically slow to compute and cannot be integrated within large-scale neuronal simulation frameworks. We present a hybrid, machine-learning and computational-neuroscience approach that transforms analytical models of sensory neurons and synapses into deep-neural-network (DNN) neuronal units with the same biophysical properties. Our DNN-model architecture comprises parallel and differentiable equations that can be used for backpropagation in neuro-engineering applications, and offers a simulation run-time improvement factor of 70 and 280 on CPU or GPU systems respectively. We focussed our development on auditory neurons and synapses, and show that our DNN-model architecture can be extended to a variety of existing analytical models. We describe how our approach for auditory models can be applied to other neuron and synapse types to help accelerate the development of large-scale brain networks and DNN-based treatments of the pathological system.

Indexed as

Models, NeurologicalNeural Networks, ComputerAction PotentialsCochlear NerveComputer SimulationHair Cells, Auditory, InnerHumansReproducibility of ResultsSynapses

Identifiers

PMID34211095
PMCPMC8249591

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.