Evidence map›Paper›PMID 34211042›Full record

ArticleScientific reports2021

Multi-country evaluation of RISK6, a 6-gene blood transcriptomic signature, for tuberculosis diagnosis and treatment monitoring.

Rim Bayaa, Mame Diarra Bousso Ndiaye, Carole Chedid, Eka Kokhreidze, Nestani Tukvadze, Sayera Banu, Mohammad Khaja Mafij Uddin, Samanta Biswas, Rumana Nasrin, Paulo Ranaivomanana and 14 more

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 2 pooled it
1.7field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 2 syntheses or guidelines pooled it, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 12 institutions in 8 countries.

Rim Bayaa *Medical and Scientific Department, Fondation Mérieux, Lyon, France. bayaarim@gmail.com.
Mame Diarra Bousso Ndiaye *Medical and Scientific Department, Fondation Mérieux, Lyon, France.
Carole ChedidMedical and Scientific Department, Fondation Mérieux, Lyon, France.
Eka KokhreidzeNational Center for Tuberculosis and Lung Diseases (NCTLD), Tbilisi, Georgia.
Nestani TukvadzeNational Center for Tuberculosis and Lung Diseases (NCTLD), Tbilisi, Georgia.
Sayera BanuInternational Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
Mohammad Khaja Mafij UddinInternational Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
Samanta BiswasInternational Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
Rumana NasrinInternational Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
Paulo RanaivomananaInstitut Pasteur de Madagascar, Antananarivo, Madagascar.
Antso Hasina RaherinandrasanaCentre Hospitalier Universitaire de Soins et Santé Publique Analakely (CHUSSPA), Antananarivo, Madagascar.
Julio RakotonirinaCentre Hospitalier Universitaire de Soins et Santé Publique Analakely (CHUSSPA), Antananarivo, Madagascar.
Voahangy RasolofoInstitut Pasteur de Madagascar, Antananarivo, Madagascar.
Giovanni DeloguDipartimento di Scienze di Laboratorio e Infettivologiche, Fondazione Policlinico Universitario "A. Gemelli", IRCCS, Rome, Italy.
Flavio De MaioDipartimento di Scienze di Laboratorio e Infettivologiche, Fondazione Policlinico Universitario "A. Gemelli", IRCCS, Rome, Italy.
Delia GolettiTranslational Research Unit, Department of Epidemiology and Preclinical Research, "L. Spallanzani" National Institute for Infectious Diseases (INMI), IRCCS, Rome, Italy.
Hubert EndtzErasmus MC, Medical Microbiology and Infectious Diseases, University Medical Center Rotterdam, Rotterdam, The Netherlands.
Florence AderService des Maladies Infectieuses et Tropicales, Hospices Civils de Lyon, Lyon, France.
Monzer HamzeLaboratoire Microbiologie, Santé et Environnement (LMSE), Doctoral School of Sciences and Technology, Faculty of Public Health, Lebanese University, Tripoli, Lebanon.
Mohamad Bachar IsmailLaboratoire Microbiologie, Santé et Environnement (LMSE), Doctoral School of Sciences and Technology, Faculty of Public Health, Lebanese University, Tripoli, Lebanon.
Stéphane PouzolMedical and Scientific Department, Fondation Mérieux, Lyon, France.
Niaina RakotosamimananaInstitut Pasteur de Madagascar, Antananarivo, Madagascar.
Jonathan HoffmannMedical and Scientific Department, Fondation Mérieux, Lyon, France. jonathan.hoffmann@fondation-merieux.org.
HINTT working group within the GABRIEL network
International Centre for Diarrhoeal Disease Research · BDUniversidad Nacional de Asunción · PYFondation Mérieux · FRInstitut Pasteur de Madagascar · MGLebanese University · LBAgostino Gemelli University Polyclinic · ITNational Center for Tuberculosis and Lung Disease · GEUniversity of Antananarivo · MGErasmus MC · NLHospices Civils de Lyon · FRIstituto Nazionale per le Malattie Infettive Lazzaro Spallanzani · ITUniversité Claude Bernard Lyon 1 · FR

Funding

Emory-Georgia TB Research Training ProgramD43TW007124 · FIC · EMORY UNIVERSITY · PI HENRY M BLUMBERG, Nestani Tukvadze · 2004 to 2026
$4.6M
FIC NIH HHS D43 TW007124
6 · The paper itself

Abstract

There is a crucial need for non-sputum-based TB tests. Here, we evaluate the performance of RISK6, a human-blood transcriptomic signature, for TB screening, triage and treatment monitoring. RISK6 performance was also compared to that of two IGRAs: one based on RD1 antigens (QuantiFERON-TB Gold Plus, QFT-P, Qiagen) and one on recombinant M. tuberculosis HBHA expressed in Mycobacterium smegmatis (IGRA-rmsHBHA). In this multicenter prospective nested case-control study conducted in Bangladesh, Georgia, Lebanon and Madagascar, adult non-immunocompromised patients with bacteriologically confirmed active pulmonary TB (ATB), latent TB infection (LTBI) and healthy donors (HD) were enrolled. ATB patients were followed-up during and after treatment. Blood RISK6 scores were assessed using quantitative real-time PCR and evaluated by area under the receiver-operating characteristic curve (ROC AUC). RISK6 performance to discriminate ATB from HD reached an AUC of 0.94 (95% CI 0.89-0.99), with 90.9% sensitivity and 87.8% specificity, thus achieving the minimal WHO target product profile for a non-sputum-based TB screening test. Besides, RISK6 yielded an AUC of 0.93 (95% CI 0.85-1) with 90.9% sensitivity and 88.5% specificity for discriminating ATB from LTBI. Moreover, RISK6 showed higher performance (AUC 0.90, 95% CI 0.85-0.94) than IGRA-rmsHBHA (AUC 0.75, 95% CI 0.69-0.82) to differentiate TB infection stages. Finally, RISK6 signature scores significantly decreased after 2 months of TB treatment and continued to decrease gradually until the end of treatment reaching scores obtained in HD. We confirmed the performance of RISK6 signature as a triage TB test and its utility for treatment monitoring.

Indexed as

TranscriptomeAdultCase-Control StudiesDisease ManagementFemaleHumansLatent TuberculosisMaleMycobacterium tuberculosisProspective StudiesTriageTuberculosisTuberculosis, PulmonaryYoung Adult

Identifiers

PMID34211042
PMCPMC8249600
OpenAlexW3177487006

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.