ArticleScientific data2021
Eight soybean reference genome resources from varying latitudes and agronomic traits.
Article in Scientific data, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- Analysis of deep-resequencing data of 984 soybean accessions reveals structural variations underlying agronomic traits.Nature communications · 2026Article
- Evolutionary and methodological considerations when interpreting gene presence-absence variation in pangenomes.NAR genomics and bioinformatics · 2026Review
- Targets and strategies to design soybean seed composition traits.The plant genome · 2025Review
- Chromosome-level genome assembly of a high-yield Chinese soybean variety Mengdou1137 unlocks genetic potential of disease and lodging resistance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- In Silico Comparison of WRKY Transcription Factors in Wild and Cultivated Soybean and Their Co-expression Network Arbitrating Disease Resistance.Biochemical genetics · 2025Article
- Genome-Wide Association Study on Imputed Genotypes of 180 Eurasian SoybeanPlants (Basel, Switzerland) · 2025Article
- SoyOD: An Integrated Soybean Multi-omics Database for Mining Genes and Biological Research.Genomics, proteomics & bioinformatics · 2025Article
- Soybean genomics research community strategic plan: A vision for 2024-2028.The plant genome · 2024Article
- A stepwise guide for pangenome development in crop plants: an alfalfa (Medicago sativa) case study.BMC genomics · 2024Review
- High-quality genome of a modern soybean cultivar and resequencing of 547 accessions provide insights into the role of structural variation.Nature genetics · 2024Article
- SoyMD: a platform combining multi-omics data with various tools for soybean research and breeding.Nucleic acids research · 2024Article
- Near-gapless genome assemblies of Williams 82 and Lee cultivars for accelerating global soybean research.The plant genome · 2023Article
- Diversity of fatty acid biosynthesis genes across the soybean pangenome.The plant genome · 2023Article
- Full-Length Transcriptome Sequencing Reveals Alternative Splicing and lncRNA Regulation during Nodule Development inInternational journal of molecular sciences · 2022Article
- Genome assembly of the JD17 soybean provides a new reference genome for comparative genomics.G3 (Bethesda, Md.) · 2022Article
- A giant NLR gene confers broad-spectrum resistance to Phytophthora sojae in soybean.Nature communications · 2021Article
- Eight soybean reference genome resources from varying latitudes and agronomic traits.Scientific data · 2021Article
- Legume Breeding for the Agroecological Transition of Global Agri-Food Systems: A European Perspective.Frontiers in plant science · 2021Article
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10 authors.
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Abstract
Comparative analysis of multiple reference genomes representing diverse genetic backgrounds is critical for understanding the role of key alleles important in domestication and genetic breeding of important crops such as soybean. To enrich the genetic resources for soybean, we describe the generation, technical assessment, and preliminary genomic variation analysis of eight de novo reference-grade soybean genome assemblies from wild and cultivated accessions. These resources represent soybeans cultured at different latitudes and exhibiting different agronomical traits. Of these eight soybeans, five are from new accessions that have not been sequenced before. We demonstrate the usage of these genomes to identify small and large genomic variations affecting known genes as well as screening for genic PAV regions for identifying candidates for further functional studies.
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